Advisory Board and Editors Scientific Computing & Simulation
Ari Melo Mariano
Ari Melo Mariano is a Data Scientist, Post-Doctorate in Data Science, Post-Doctorate in Scientific Methodology and Quantitative Methods, Doctor in Administration, Master in Administration, and Bachelor in Administration. A specialist in data science, he also has an MBA in European consumer law. He is currently a professor and researcher in production engineering at the University of Brasilia (UNB), Brazil. Professor of the Professional Master of Applied Computing in the Department of Computer Science and Collaborating Professor of 6 doctorate programs in Latin America.
Ari is the Director of DataLab at the Production Engineering Course at the University of Brasilia. As a researcher, he works in data science, behavioral big data, bibliometrics, analysis via structural equation models, and text mining. The most related areas of his research are the acceptance and use of technology, consumer behavior, active methodologies, learning styles, Industry 4.0 and 5.0, smart and shared cities, and interculturality.
Robert H McDonald
Robert H. McDonald is Dean of University Libraries and Professor of Library Administration. He is responsible for leading the Boulder campus library system in fulfilling their mission to inspire learning, research, and discovery by connecting knowledge, information, and people.
His expertise and interests include teaching and learning technologies that enable libraries to better support researchers at all levels, open source software development, scholarly communications, and new model publishing. Robert has also been an active proponent of diversity initiatives in libraries throughout his career and is committed to creating library spaces that are welcoming, diverse and inclusive for all of our Library users.
Gang Mei
Dr. Gang Mei is an Associate Professor in Scientific Computing in Engineering at China University of Geosciences (Beijing). He received his Ph.D degree in 2014 from the University of Freiburg in Germany. His main research interests are in the areas of Numerical Simulation and Computational Modeling, GPU Computing, Machine Learning, Data Mining, and Network Science and Applications. He is the IEEE Member, and has served as an Academic Editor for the journals IEEE Access, and PeerJ Computer Science.
Christopher J Mungall
I am a Computer Research Scientist in the Environmental Genomics and Systems Biology division at Lawrence Berkeley Laboratory. My work focuses on computational methods for representing and interpreting complex biological data, in particular through the development and application of knowledge representation structures such as ontologies.
Kok Yew Ng
I received the BEng (Hons) in Electrical and Computer Systems Engineering and the Ph.D. in Fault Diagnosis and Control Systems from Monash University in 2006 and 2009, respectively. I am currently a Reader in Mechatronics Engineering and Control at the School of Engineering, Ulster University, UK, and I am attached to the Engineering Research Institute.
My research interests include fault diagnosis, mathematical modelling, digital twin, and data analytics for anomaly detection and classification.
In 2014–2015, I was a postdoctoral researcher at the Division of Vehicular Systems, Linköping University, Sweden, where I worked with Volvo Car Corporation (VCC) on advanced fault diagnosis schemes in vehicular engines using model-based and data-driven methods. For this research, I was instrumental in developing a Digital Twin/Simulation Testbed on the MATLAB/Simulink platform for realistic simulation and testing of residuals generation and fault diagnosis methods. This research work was published in the IEEE Control Systems Magazine and the Digital Twin/Simulation Testbed can be downloaded via the main hosting site or its mirror at Linköping University.
Throughout my career, I have secured more than £6.5 million in research grants from various funders such as the Engineering and Physical Sciences Research Council (EPSRC), UK Research and Innovation (UKRI), Global Challenges Research Fund (GCRF), and the Northern Ireland Department for the Economy in the UK; the Fundamental Research Grant Scheme (FRGS), Exploratory Research Grant Scheme (ERGS), and EScienceFund from the Ministry of Higher Education in Malaysia; and industries such as Volvo Car Corporation in Gothenburg, Sweden.
Overall, I have successfully supervised no less than 2 postdoctorals, 8 PhD, and 3 Master’s by Research candidates.
I am also currently attached to the Digital Catapult as an awardee of the EPSRC Innovation Launchpad Network+ (ILN+) Researcher in Residence Scheme. This research project aims to develop an energy mapping Digital Twin technology that contributes towards net zero in wind turbine energy. This technology encompasses the entire energy lifecycle, from mining through storage to utilisation in Northern Ireland (NI). This project also involves collaboration with the Offshore Renewable Energy Catapult.
Other highlights include being a co-investigator in SAFEWATER, a £5 million project funded by UKRI-GCRF, where I led the development and the optimisation of embedded algorithms to control low-cost water disinfection technologies used in the rural areas in South America.
In addition, during the COVID-19 pandemic, I led the Modelling and Forecast Task Force at Ulster where we worked with the Southern Health and Social Care Trust to provide analysis to the Government Specialist Modelling Response Expert Group (SMREG) in Northern Ireland. The main purpose of the project was to validate and inform the SMREG as well as help governing bodies in Northern Ireland to better plan for intervention measures and ultimately flatten the curve. I was also a member of the COVID-19 Task Force set up by the IEEE Region 8 community. In addition, I led a team of researchers and data scientists from Ulster and Queen’s University Belfast to work with the Incident Controller for the State Health Incident Control Centre and Deputy Chief Health Officer of the Department of Health in Western Australia to model the outbreak of COVID-19 on commercial cargo vessels.
I am a Senior Member of the IEEE and I am currently the Vice-Chair of the IEEE Control Systems Society (CSS), UK and Ireland Chapter.
I am the Moderator for the IEEE TechRxiv, the Associate Editor for IEEE Access, Editor for PeerJ Computer Science, and Section Editor for Sage Science Progress.
I am also an Adjunct Senior Research Fellow with Monash University Malaysia where I served as a Lecturer from 2009, and subsequently as Senior Lecturer till 2017.
Binh P. Nguyen
Senior Lecturer in Data Science at the School of Mathematics and Statistics in Victoria University of Wellington (New Zealand). Former Scientist at the Institute of High Performance Computing, A*STAR (Singapore). Former Research Fellow at Duke-NUS Medical School and National University of Singapore (Singapore).
Thiago Parente
Scientist in Public Health at the Laboratory of Functional Genomics and Bioinformatics at the Oswaldo Cruz Institute (IOC, Fiocruz), Rio de Janeiro, Brazil. Scientific coordinator of the Institutional Bioinformatics Platform. CNPq Level 2 Research Productivity Scholar (Genetics). Permanent professor at the Graduate program on Systems and Computational Biology IOC, Fiocruz. Graduated in Biological Sciences - Genetics major - from the Federal University of Rio de Janeiro (2006), with a Master's degree in Cell and Molecular Biology from the IOC (2008) and PhD in Biophysics from UFRJ (2012). Through high performance technologies for DNA sequencing and computational data analysis, I investigate the effects of pollution on fauna, using fish as model organisms, and their responses and genetic adaptations to pollutants, especially those involved in the xenobiotic biotransformation system.
Claire B Paris
Claire Beatrix Paris is a Professor in the department of Ocean Science, University of Miami’s Rosenstiel School of Marine and Atmospheric Science. Director of the Physical-Biological Interactions Lab, she focuses on biophysical dispersion at sea, as well as the transport and fate of pollutants and oil spills from deep-sea blowout. Paris has brought recognition to the key role of behavior of the pelagic larval stage in the connectivity of marine populations and the function of ecosystems.
Paris has developed numerical and empirical tools for her laboratory’s research, both used worldwide: the Connectivity Modeling System (CMS) is an Open-Source Software (OSS) that virtually tracks biotic and abiotic particles in the ocean, and the Drifting In Situ Chamber (DISC) is a field instrument used to track the movement behavior of the early life history stages of marine organisms and detect the signals they use to orient and navigate.
James B Procter
I studied Chemistry at The University of York, Computer Science at The University of Leeds, and obtained a PhD at the Australian National University. I worked on the comparison, classification and prediction of protein structure at ANU and in Germany at the University of Hamburg before joining the Jalview project in Dundee in 2004.
I co-founded the VIZBI conference in 2009, and joined PeerJ CS as Academic Editor in 2014. I serve on a variety of biological and computer science peer review panels and conference program committees. I'm interested in how we can do better science by creating better tools for data analysis and communication.
Sven Rahmann
Prof. Sven Rahmann is professor of Algorithmic Bioinformatics at the Center for Bioinformatics, Saarland University, Saarbrücken, Germany. Previously, Sven was UA Ruhr Professor of Computational Biology and Genome Informatics at the Faculty of Medicine at Duisburg-Essen University (2011-2021), associate professor for Bioinformatics for High-Throughput Technologies at the Chair of Algorithm Engineering, Computer Science Department, TU Dortmund (2007-2011). Sven wrote his doctoral thesis on oligonucleotide design for microarrays in the Computational Molecular Biology group at the Max Planck Institute for Molecular Genetics in Berlin.
Rommel T J Ramos
The Rommel Ramos Professor of Bioinformatics of Federal University of Para (Brazil) affiliated member of Brazilian Science Academy and CNPq Researcher (level 1-D). Since 2008 works with genome assembly and RNA-Seq analysis, he is the leader of the bioinformatic development group of the Biologic Engineering Laboratory in Park of Science and Technology (Pará/Brazil).
Anne Reinarz
Dr. Anne Reinarz is an Assistant Professor at Durham University in the Scientific Computing Group. Her research is at the interface of three main areas: Application science (mechanical engineering, astrophysics and seismology), numerical methods development (fast solvers, high performance computing) and uncertainty quantification.