Advisory Board and Editors Bioinformatics

Patrick Aloy

Dr Patrick Aloy is an ICREA Research Professor and Principal Investigator of the Structural Systems Biology lab at the IRB. He has a BSc in Biochemistry and a MSc in Biotechnology from the Univ. Autònoma de Barcelona, Spain, and spent six years as postdoctoral researcher and staff scientist at the European Molecular Biology Laboratory, Heidelberg, Germany. For fifteen years, Dr Aloy has been developing and implementing new technologies and algorithms, applying state-of-the-art methods to specific problems and bridging the gap between theoretical models and experiments in different disciplines. In the last years, he has pioneered system-scale analyses of macromolecular assemblies and networks using high-resolution three-dimensional structures, which has become a new discipline in structure prediction. Dr Aloy has over 100 publications in first-rate journals, with over 9500 citations and remarkable press coverage, illustrating the scientific and social impact of the work.

Sophia Ananiadou

Sophia Ananiadou (PhD) is Professor in Computer Science at the School of Computer Science, the University of Manchester. She is also Director of the UK National Centre for Text Mining and a founding member of the SIG in BioNLP, ACL.

Maria Anisimova

Since 2014, senior research fellow and lecturer at the Institute of Applied Simulations of the Zurich University of Applied Sciences (ZHAW). Editor of BMC Evol Biol and PLoS ONE. In 2012 edited a book in 2 volumes "Evolutionary Genomics: Statistical and computational methods".

Adam Auton

Assistant Professor of Computation Genetics at Albert Einstein College of Medicine, NY.

Ramy K Aziz

I am a professor of Microbiology and Immunology at Faculty of Pharmacy, Cairo University, Egypt. I am interested in microbiome research, pharmacomicrobiomics, evolution and emergence microbial pathogenesis and resistance, microbial and phage genomics, antibiotic resistance surveillance, adaptive laboratory evolution, metabolic reconstruction and pathway gap filling, and virulence gene discovery.

Jaume Bacardit

Jaume Bacardit is a Senior Lecturer in Biodata Mining at Newcastle University. His research is focused on the development of machine learning methods for complex, and large-scale datasets, and the application of these to biological/biomedical problems.

Jürg Bähler

Jürg Bähler is a Professor of Systems Biology at University College London. His laboratory studies genome regulation during cellular proliferation, quiescence, and ageing using fission yeast (Schizosaccharomyces pombe) as a model system. They apply multiple genetic, computational and genome-wide approaches for systems-level understanding of regulatory processes and complex relationships between genotype, phenotype, and environment, including roles of genome variation and evolution, transcriptome regulation, and non-coding RNAs.

Jürg Bähler is an elected Member of the European Molecular Biology Organisation (EMBO) and a Fellow of the Royal Society of Biology, and he received a Wellcome Trust Senior Investigator Award and a Royal Society Wolfson Research Merit Award.

Vladimir B Bajic

I am director of the Computational Bioscience Research Center and Professor in the CEMSE Division at KAUST. I joined KAUST in May 2009. Before that time I was a Professor of Bioinformatics, as well as Acting and Deputy Director of the South African National Bioinformatics Institute (SANBI) at the University of the Western Cape in South Arica. I worked in industry and several academic and research institutions in several countries, including Vinca Nuclear Science Institute in Serbia and the Institute for Infocomm Research (I2R) in Singapore, where I was head of the Knowledge Extraction Laboratory. I extensively published across several fields and designed many bioinformatics tools and resources. My work in modeling and artificial intelligence has resulted in several promoter recognition tools and a knowledge discovery platform that found commercial applications. More than 60 master and doctoral students have graduated under my supervision. I am an elected member of the Academy of Nonlinear Sciences in Russia, and while in South Africa I was a registered professional engineer. For my bioinformatics work, I was awarded the first South African National Research Chair (Tier 1) in Bioinformatics and Human Health. My graduate degree in electrical engineering and master’s degree in electrical engineering sciences I earned from the University of Belgrade in Serbia, followed by a doctorate of engineering sciences in electrical engineering from the University of Zagreb in Croatia.

David A Baltrus

Assistant Professor interested in evolutionary microbiology and genomics

Matthew PG Barnett

Senior Research Scientist, Food Nutrition & Health Team, AgResearch Limited. Based at the University of Auckland's Liggins Institute. Section Editor in "Nutrigenomics", European Journal of Nutrition.

Ugo Bastolla

I got my PhD in Physics at Rome University, working with Luca Peliti and Giorgio Parisi on biologically inspired problems: evolutionary models and Boolean networks. Since then, I have always been interested in computational biology: Protein folding, Stability and population biology constraints in protein evolution, Conformation changes in proteins, Structural evolution of proteins, Theoretical ecology, Ecological interactions among microorganisms.

Anaïs Baudot

I'm a Systems Biologist with a background in Biology, Genetics and Bioinformatics. I hold a PhD from the Aix-Marseille University. After a Post-Doc in the CNIO (Madrid, Spain), I got a CNRS Researcher position in 2010. I'm working since then in the Marseille Institute of Mathematics (CNRS-AMU). I'm interested in -omics studies (interactomes), Networks (partitioning, boolean modelling), and questions related to human diseases, in particular complex diseases, cancers and comorbidities.