Advisory Board and Editors Computational Biology
Jonathan A Eisen
Full Professor, University of California, Davis (Depts. of Medical Microbiology and Immunology and Evolution and Ecology) and Adjunct Scientist DOE Joint Genome Institute.
Obsessed with microbes, the Redsox, open science, and STEM diversity.
Ahmed Elazab
Ahmed Elazab received his Ph.D. degree in pattern recognition and intelligent systems from Shenzhen Institutes of Advanced Technology, University of Chinese Academy of Sciences, China, Jan 2017. He was a postdoctoral research fellow from Jan 2018 to April 2020 at the School of Biomedical Engineering, Shenzhen University, Shenzhen, China where he is currently a research associate since Jan 2021. Dr. Elazab has authored and co-authored more than 80 peer-reviewed papers and has been a reviewer in prestigious peer-reviewed international journals. His main research interests include machine and deep learning, medical image analysis, brain anatomy analysis, and computer-aided detection and diagnosis.
Richard D Emes
Professor of Bioinformatics at Nottingham School of Veterinary Medicine and Science and Director of the University of Nottingham Advanced Data Analysis Centre.
Research interests are in bioinformatics, comparative genomics and molecular evolution particularly in the fields of pathogen biology, epigenetics and neurobiology.
Scott Emrich
I received a BS in Biology and Computer Science from Loyola College in Maryland and a PhD in Bioinformatics and Computational Biology from Iowa State University (ISU). Upon graduation, I received a ISU Research Excellence award and the university-wide Zaffrano Prize for Graduate Research. Starting after graduation in 2007 I spent the first ten years of my career at the University of Notre Dame, and now am an Associate Professor at the University of Tennessee (Knoxville). My research interests include genome-focused bioinformatics, parallel and distributed computing, and the intersection of biological applications and second and third-gen sequencing. Nearly all of my research has been funded by the National Institute of Health (NIH).
Barbara E. Engelhardt
Senior Investigator at Gladstone Institutes, Professor of Biomedical Data Science at Stanford University. My group develops statistical models and methods for high-dimensional genomic data, modeling human genetic variation and its impact on gene expression and splicing, with the goal of identifying mechanisms of human disorders and diseases.
A. Murat Eren
I am a computer scientist and a microbial ecologist. I develop algorithms and software platforms to make sense of the ecology of microbes through marker genes, metagenomes, and metatranscriptomes.
Jason Ernst
Jason joined the faculty at UCLA in the Department of Biological Chemistry, the Computer Science Department, and the Bioinformatics Program in 2012. Prior to that, he was a postdoctoral fellow in Manolis Kellis' Computational Biology Group in the Computer Science and Artificial Intelligence Laboratory at MIT and affiliated with the Broad Institute. In 2008, Jason completed a PhD advised by Ziv Bar-Joseph where he was part of the Systems Biology Group, Machine Learning Department, and School of Computer Science at Carnegie Mellon University. Jason also earned BS degrees in Computer Science and Mathematics from the University of Maryland College Park. He is a member of the editorial board at Genome Research and has been a program co-chair for the ISMB Regulatory Genomics Special Interest Group (RegGenSIG) meeting. He is a recipient of a Sloan Fellowship, NSF Career Award, NSF Postdoctoral Fellowship, a Siebel Scholarship, and a Goldwater Scholarship.
Rudi H. Ettrich
Rudi received his prediploma in chemistry (Vordiplom) from Eberhard-Karls-University, Tuebingen, Germany, in 1993, his Master of sciences (Mgr.) in physical and macromolecular chemistry from Charles University, Prague, in 1998 and his PhD. in physical chemistry from Charles University, Prague, in 2002.
Since 2013 he is a full Professor (Prof.) in biophysics and currently acts as the President/CEO of Larkin University, Miami, FL and holds a faculty appointment at the College of Biomedical Sciences. He also holds community-based adjunct faculty positions at the Wertheim College of Medicine, Florida International University, Miami, FL, and the Department of Mathematics and Physics, Charles University, Czechia.
Prior to joining Larkin University Rudi was affiliated with the Czech Academy of Sciences, where he acted as director, group leader and senior researcher at the Center for Nanobiology and Structural Biology of the Institute of Microbiology in Nové Hrady, Academy of Sciences of the Czech Republic
Rudi's research is focused on the relationship between structure and function of proteins, dynamic changes related to functional processes on the level of proteins and the mutual interaction of cofactors and subunits in protein complexes. The research approach is very complex using various methods of protein research with a synthesis of theoretical and experimental methods.
Kjiersten Fagnan
Kjiersten Fagnan joined the JGI in 2012 after completing a petascale postdoctoral fellowship at NERSC and CRD. In 2014 Fagnan became the JGI-NERSC Engagement Lead with a focus on adapting JGI workloads to run on supercomputing hardware. She is also working to understand the data-intensive nature of JGI workloads. Fagnan earned her PhD in Applied Mathematics at the University of Washington in 2010 and her BA from UC Berkeley in 2002.
Brant C Faircloth
Associate Professor of Biological Sciences at Louisiana State University and Research Associate as the LSU Museum of Natural Sciences. Research interests include population and evolutionary genomics of non-model organisms; community genomics; genotype-phenotype interactions; (immuno-)genetic basis of mate choice; mating behavior; social behavior; and natural history.
Joseph Felsenstein
Joe Felsenstein is Professor of the Department of Genome Sciences and in the Department of Biology, and adjunct Professor in the Department of Statistics and in the Department of Computer Science and Engineering at the University of Washington, Seattle. Past President of the Society for the Study of Evolution. Recipient of the Weldon Memorial Prize, the Darwin-Wallace Medal of the Linnean Society of London, the John J. Carty Award for the Advancement of Science from the National Academy of Sciences and of the 2013 International Prize for Biology of the Japan Society for the Promotion of Sciences. He is a Member of the American Academy of Arts and Sciences and the National Academy of Sciences. On the Editorial Board of five journals.
He describes himself as "world-renowned for my outstanding modesty".
Carlos Fernandez-Lozano
Dr. Carlos Fernandez-Lozano is an Associate Professor at the University of A Coruña (UDC). He is a biomedical data scientist with a deep interest in discovering the complex relationships between different biological levels. His research track is multidisciplinary as he is trained in computer science, machine learning, bioinformatics, and biostatistics. His research line is focused on how biological interactions are manifested at the disease level through the use, development, and application of kernel-based computational approaches that integrate different levels of biological data on the microorganism, gene, protein, and medical imaging axis.