Advisory Board and Editors Databases

Journal Factsheet
A one-page PDF to help when considering journal options with co-authors
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I told my colleagues that PeerJ is a journal where they need to publish if they want their paper to be published quickly and with the strict peer review expected from a good journal.
Sohath Vanegas,
PeerJ Author
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Daniel de Oliveira

Daniel de Oliveira is a professor of computer science at Universidade Federal Fluminense in Brazil. His current research interests include scientific workflows, provenance, cloud computing, data scalable and intensive computing, high-performance computing, and distributed and parallel databases. He serves or served on the program committee of major international and national conferences (VLDB, IPAW, IEEE eScience, SBBD, etc.) and is a member of IEEE, ACM, and the Brazilian Computer Society. He has published many technical papers and is a co-author of the book “Data-Intensive Workflow Management For Clouds and Data-Intensive and Scalable Computing Environments” published by Morgan & Claypool in 2019.

Peter Denning

Distinguished professor of computer science at Naval Postgraduate School. Past president of ACM. Past editor in chief of Communications of ACM. Currently editor of ACM Ubiquity. Author of ten books, most recent Great Principles of Computing (MIT Press 2015). Author of over four hundred scientific papers and articles.

Antonio Jesus Diaz-Honrubia

Antonio J. Díaz-Honrubia is an Associate Professor at Universidad Politécnica de Madrid, to which he joined after holding an Assistant Professorship at Universidad de Oviedo and a part time Professorship at Universidad de Castilla-La Mancha (a job that he combined with a position in the R&D department of a private company in the telecommunications field).

He received his Ph.D. in 2016 from the Universidad de Castilla-La Mancha, where he had also received his B.Sc. (Spanish National Extraordinary Award) and M.Sc. in Computer Science and Engineering.

His research interests include video transcoding, perceptual video coding, multimedia standards, scalable video coding, and simultaneous video coding. More recently, he is moving forward to the topic of data analysis and validation.

He has been a visiting researcher at Ghent University (Belgium) for 4 months, the Florida Atlantic University (USA) for 3 months, and the Technische Informationsbibliothek (TIB) (Germany) for 6 months.

He has more than 30 publications in these areas in international refereed journals and conference proceedings.

Gillian Dobbie

Gill worked in industry for a couple of years before doing research at the University of Melbourne, Victoria University of Wellington and the National University of Singapore. Her main areas of interest pertain to databases and the web. She has worked in the foundations of database systems, defining logical models for various kinds of database systems, and reasoning about the correctness of algorithms in that setting. She publishes her research in high ranking conferences and journals.

Martin Fowler

I am an author, speaker… essentially a loud-mouthed pundit on the topic of software development. I work for ThoughtWorks, a software delivery company, where I have the exceedingly inappropriate title of “Chief Scientist”. I’ve written half-a-dozen books on software development, including Refactoring and Patterns of Enterprise Application Architecture. I write regularly about software development on martinfowler.com

Alessandro Frigeri

My research interest focuses on Planetary Science, Geoinformatics, and Geophysical data acquisition (both in the field and from remote sensing instruments), processing, and comparative analysis of datasets with different data models (e.g. topography, spectral and visible imagery and radar). I use and develop GIS tools for quantitative spatial analysis in my research activity.

I'm part of Scientific Teams of instruments onboard missions to Mars (ESA's Mars Express and NASA's MRO) and asteroids belt Vesta and Ceres (NASA's Dawn).

Mariagrazia Fugini

Research interests in data and systems security, information system development, services for Public Administrations, Risk and Adaptive Cyber security, and services co-production. Involved in National and International Research Projects on e-Government, Web-based Information Systems, Risk and Adaptive Security, Security of Smart Environments and Service Platforms for Social Care and e-Health.

Atsushi Fukushima

I am a professor at Kyoto Prefectural University. My current research interests focus on characterization of metabolic regulatory networks and integrated analysis of multi-omics data in plants. I am a member of the editorial board for BMC Genomics, Plant Methods, Frontiers in Plant Science, Plants, BioTech, and PeerJ.

Luiz Gadelha

Luiz Gadelha works in the German Human Genome-Phenome Archive (GHGA) at the German Cancer Research Center (DKFZ) in Germany and the National Laboratory for Scientific Computing (LNCC) in Brazil. He received his D.Sc. degree in Computer and Systems Engineering from the Federal University of Rio de Janeiro, Brazil. He has been involved in the research and development of parallel and distributed scientific workflow management systems and scientific databases. He has participated in research projects in the bioinformatics and biodiversity application areas. His main research interests are scientific data management, computational reproducibility, and high performance computing.

Sònia Garcia

My research is mainly directed towards understanding processes involved in plant genome evolution and organisation, from the sequence to the whole genome. Three areas are highlighted: the study of the evolution of genome size; the structure, organisation and function of ribosomal RNA genes (rDNA) and telomere repeats, and the role of polyploidy and transposable elements (TE) in genome evolution. I have advanced these fields by: (1) the discovery of a novel arrangement of rDNA, first in several Asteraceae and later extended to gymnosperms, (2) the discovery of new telomere sequences in several organisms and (3) the launch and updating of four genomic databases, one compiling Asteraceae genome sizes; the next, on the number and distribution of rDNA sites in plant chromosomes; the following on the distribution of B chromosomes across biodiversity, and the most recent one on plant sex chromosomes. I am the PI of a project on the role of ribosomal DNA in evolution, including the analyses of the repeatome. I was recently involved in a project to examine the role of TE in the evolution of non-model plants and I also participate in a project on the origin and varieties of Cannabis. Beyond this, last year I started an initiative in my Institute to stress the role of women in science, by a series of conferences explaining the biographies and discoveries of relevant scientists in the fields of botany, genetics and genomics, both to the specialised and general public.

Joseph J Gillespie

Dr. Gillespie is an evolutionary biologist with broad interests in organismal and molecular evolution. The major focus of his current research is deciphering the mechanisms by which obligate intracellular species of Rickettsiales (Alphaproteobacteria) invade, survive and replicate within eukaryotic cells.

In research funded by the National Institutes of Health, Dr. Gillespie utilizes phylogenetics, comparative genomics and bioinformatics to guide experimental research on various pathogenic species of Rickettsia and their associated arthropod vectors. His early research resulted in the reclassification of Rickettsia species and the identification of many lineage-specific pathogenicity factors. Through years of intense scrutinization of dozens of diverse rickettsial genomes, Dr. Gillespie and colleagues have described a large, dynamic mobilome for Rickettsia species, resulting in the identification of integrative conjugative elements as the vehicles for seeding Rickettsia genomes with many of the factors underlying obligate intracellular biology and pathogenesis. Via an iterative process of genome sequencing, phylogenomics, bioinformatics, and classical molecular biology and microbiology, Dr. Gillespie continues to lead and assist research projects on the characterization of rickettsial gene and protein function, as well as the description of cell envelope glycoconjugates.

Hongfei Hou

Hongfei Hou, a senior scientist at Pacific Northwest National Laboratory, has attained a Ph.D. in Computer Science from Washington State University. His research area includes cloud computing and machine learning.