PeerJ Preprints - Table of Contents

February 23, 2016 - Version: 1

Influence of sugar concentration on physicochemical properties and sensory attributes of sapodilla jam

Aftab Ahmed, Shinawar Waseem Ali, Khalil ur Rehman, Shakir Manzoor, Syed Rajab Ayub, Mahrukh Ilyas

https://doi.org/10.7287/peerj.preprints.1777v1

February 19, 2016 - Version: 2

Sequencing 16S rRNA gene fragments using the PacBio SMRT DNA sequencing system

Patrick D Schloss, Matthew L Jenior, Charles C. Koumpouras, Sarah L Westcott, Sarah K Highlander

https://doi.org/10.7287/peerj.preprints.778v2

February 21, 2016 - Version: 1

Identification of phenolic secondary metabolites from Schotia brachypetala Sond. (Fabaceae) and demonstration of their antioxidant activities in Caenorhabditis elegans

Mansour Sobeh, Esraa A ElHawary, Herbenya Peixoto, Rola M Labib, Heba Handoussa, Noha Swilam, Ahmed H. El-Khatib, Farukh Sharapov, Tamer Mahmoud, Sonja Krstin, Michael W Linscheid, Abdel Nasser B. Singab, Michael Wink, Nahla Ayoub

https://doi.org/10.7287/peerj.preprints.1768v1

February 6, 2016 - Version: 1

Adoption of machine learning techniques in Ecology and Earth Science

Anne E Thessen

https://doi.org/10.7287/peerj.preprints.1720v1

February 19, 2016 - Version: 1

Exact pattern matching: Adapting the Boyer-Moore algorithm for DNA searches

Jens Allmer

https://doi.org/10.7287/peerj.preprints.1758v1

February 2, 2016 - Version: 2

ANGSD-wrapper: utilities for analyzing next generation sequencing data

Arun Durvasula, Paul J Hoffman, Tyler V Kent, Chaochih Liu, Thomas J Y Kono, Peter L Morrell, Jeffrey Ross-Ibarra

https://doi.org/10.7287/peerj.preprints.1472v2

February 27, 2016 - Version: 1

pyAffy: An efficient Python/Cython implementation of the RMA method for processing raw data from Affymetrix expression microarrays

Florian Wagner

https://doi.org/10.7287/peerj.preprints.1790v1

February 9, 2016 - Version: 1

Sympathy for the devil: a conservation strategy for devil and manta rays

Julia M Lawson, Rachel HL Walls, Sonja V Fordham, Mary P O'Malley, Michelle R Heupel, Guy Stevens, Daniel Fernando, Ania Budziak, Colin A Simpfendorfer, Lindsay NK Davidson, Isabel Ender, Malcolm P Francis, Giuseppe Notarbartolo di Sciara, Nicholas K Dulvy

https://doi.org/10.7287/peerj.preprints.1731v1

February 29, 2016 - Version: 1

Geography and location are the primary drivers of office microbiome composition

John H Chase, Jennifer Fouquier, Mahnaz Zare, Derek L Sonderegger, Rob Knight, Scott Kelley, Jeffrey A Siegel, J Gregory Caporaso

https://doi.org/10.7287/peerj.preprints.1797v1

February 2, 2016 - Version: 1

Vaccine coverage and the cost effectiveness of dengue vaccine in South East Asia

Sittisede Polwiang

https://doi.org/10.7287/peerj.preprints.1694v1

February 20, 2016 - Version: 3

DICOM for quantitative imaging biomarker development: A standards based approach to sharing clinical data and structured PET/CT analysis results in head and neck cancer research

Andriy Fedorov, David Clunie, Ethan Ulrich, Christian Bauer, Andreas Wahle, Bartley Brown, Michael Onken, Jörg Riesmeier, Steve Pieper, Ron Kikinis, John Buatti, Reinhard R. Beichel

https://doi.org/10.7287/peerj.preprints.1541v3

February 23, 2016 - Version: 1

OncoLnc: Linking TCGA survival data to mRNAs, miRNAs, and lncRNAs

Jordan Anaya

https://doi.org/10.7287/peerj.preprints.1780v1

February 10, 2016 - Version: 2

Screening for Alternaria brassicicola resistance in the Brassicaceae: Bio-assay optimization and confocal microscopy insights into the infection process

Marzena Nowakowska, Małgorzata Wrzesińska, Piotr Kamiński, Marcin Nowicki, Małgorzata Lichocka, Michał Tartanus, Elżbieta U Kozik

https://doi.org/10.7287/peerj.preprints.1360v2

February 16, 2016 - Version: 2

Retrospective study of the effectiveness of four different treatments of equine cheek teeth periodontal disease

Kirsten Jackson, Lukas M. Weber, Marc Tennant

https://doi.org/10.7287/peerj.preprints.703v2

February 3, 2016 - Version: 1

Development and validation of a direct real-time PCR assay for Mycobacterium bovis and implementation into the United States national surveillance program

Philip E Dykema, Kevin D Stokes, Nadine R Beckwith, James W Mungin, Lizhe Xu, Deborah J Vickers, Monica M Reising, Doris M Bravo, Bruce V Thomsen, Suelee Robbe-Austerman

https://doi.org/10.7287/peerj.preprints.1703v1

February 2, 2016 - Version: 1

Identifying contamination with advanced visualization and analysis practices: metagenomic approaches for eukaryotic genome assemblies

Tom O Delmont, A. Murat Eren

https://doi.org/10.7287/peerj.preprints.1695v1

February 23, 2016 - Version: 1

A preliminary case study of the effect of shoe-wearing on the biomechanics of a horse’s foot

Olga Panagiotopoulou, Jeffery W Rankin, Stephen M Gatesy, Hyab Mehari Abraha, Jan Janzekovic, John R Hutchinson

https://doi.org/10.7287/peerj.preprints.1779v1

February 18, 2016 - Version: 3

Coral reproduction in Western Australia

James Gilmour, Conrad W Speed, Russ Babcock