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November 2018

Table of Contents - PeerJ Preprints

November 24, 2018 - Version: 2

RNA sequencing data: hitchhiker's guide to expression analysis

Koen Van Den Berge, Katharina Hembach, Charlotte Soneson, Simone Tiberi, Lieven Clement, Michael I Love, Rob Patro, Mark Robinson

https://doi.org/10.7287/peerj.preprints.27283v2

November 5, 2018 - Version: 1

Hierarchical generalized additive models: an introduction with mgcv

Eric J Pedersen, David L. Miller, Gavin L. Simpson, Noam Ross

https://doi.org/10.7287/peerj.preprints.27320v1

November 12, 2018 - Version: 1

A false negative study of the steganalysis tool: Stegdetect

Benjamin Aziz, Jeyong Jung

https://doi.org/10.7287/peerj.preprints.27339v1

November 5, 2018 - Version: 2

Flower visitation by hoverflies (Diptera: Syrphidae) in a temperate plant-pollinator network

Jan Klecka, Jiří Hadrava, Paolo Biella, Asma Akter

https://doi.org/10.7287/peerj.preprints.26516v2

November 19, 2018 - Version: 5

A theory and methodology to quantify knowledge

Daniele Fanelli

https://doi.org/10.7287/peerj.preprints.1968v5

November 5, 2018 - Version: 2

A comprehensive RNA-Seq pipeline includes meta-analysis, interactivity and automatic reporting

Giulio Spinozzi, Valentina Tini, Laura Mincarelli, Brunangelo Falini, Maria Paola Martelli

https://doi.org/10.7287/peerj.preprints.27317v2

November 19, 2018 - Version: 3

Bioinformatics software for genomic: a systematic review on GitHub

Carlos Giovanny Hidalgo Suarez, Miguel Eduardo Guevara Burbano, Victor Andres Bucheli Guerrero, Pedro Antonio Moreno Tovar

https://doi.org/10.7287/peerj.preprints.27352v3

November 26, 2018 - Version: 2

Food web rewiring in a changing world

Timothy J Bartley, Kevin S McCann, Carling Bieg, Kévin Cazelles, Monica Granados, Matthew M Guzzo, Andrew S MacDougall, Tyler D Tunney, Bailey C McMeans

https://doi.org/10.7287/peerj.preprints.27187v2

November 19, 2018 - Version: 1

Should agility training for novice badminton players be physically or perceptually challenging?

Minkai Dong, Jidong Lyu, Thomas Hart, Qin Zhu

https://doi.org/10.7287/peerj.preprints.27359v1

November 12, 2018 - Version: 2

Automatic landslide mapping from satellite imagery with a topography-driven thresholding algorithm

Massimiliano Alvioli, Alessandro C Mondini, Federica Fiorucci, Mauro Cardinali, Ivan Marchesini

https://doi.org/10.7287/peerj.preprints.27067v2

November 29, 2018 - Version: 1

Determinants and consequences of dispersal in vertebrates with complex life cycles: a review of pond-breeding amphibians

Hugo Cayuela, Andrés Valenzuela-Sanchez, Loïc Teulier, Íñigo Martínez-Solano, Jean-Paul Léna, Juha Merilä, Erin Muths, Rick Shine, Ludivine Quay, Mathieu Denoël, Jean Clobert, Benedikt Schmidt

https://doi.org/10.7287/peerj.preprints.27394v1

November 19, 2018 - Version: 1

Sample-level sound synthesis with recurrent neural networks and conceptors

Chris Kiefer

https://doi.org/10.7287/peerj.preprints.27361v1

November 23, 2018 - Version: 1

LSTM neural network for textual ngrams

Shaun C. D'Souza

https://doi.org/10.7287/peerj.preprints.27377v1

November 15, 2018 - Version: 1

Eclipse CDT code analysis and unit testing

Shaun C. D'Souza

https://doi.org/10.7287/peerj.preprints.27350v1

November 21, 2018 - Version: 3

Differences in the use of surface water resources by desert birds are revealed using isotopic tracers

Ben Smit, Stephan Woodborne, Blair O Wolf, Andrew E McKechnie

https://doi.org/10.7287/peerj.preprints.3167v3

November 29, 2018 - Version: 1

Ten Simple Rules for Scientific Fraud & Misconduct

Nicolas P Rougier, John Timmer

https://doi.org/10.7287/peerj.preprints.27395v1

November 8, 2018 - Version: 1

Crowdsourcing in medical research: theory and practice

Joseph Tucker, Suzanne Day, Weiming Tang, Barry Bayus

https://doi.org/10.7287/peerj.preprints.27331v1

November 20, 2018 - Version: 1

Hibernation, puberty and chronic kidney disease in troglodytes from Spain half a million years ago

Antonis Bartsiokas, Juan Luis Arsuaga

https://doi.org/10.7287/peerj.preprints.27370v1

November 8, 2018 - Version: 1

Phylogenetic and phylogeographic patterns of Didymosphenia geminata on invaded sites in Chile

Bernardita Cayupe, Nicole Ehrenfeld, Rodrigo Moreno, Fabio A. Labra, Carolina Díaz

https://doi.org/10.7287/peerj.preprints.27330v1

November 8, 2018 - Version: 1

Multi-gene phylogeny and divergence estimations for Evaniidae (Hymenoptera)

Barbara J Sharanowski, Leanne Peixoto, Anamaria Dal Molin, Andrew R Deans

https://doi.org/10.7287/peerj.preprints.27329v1

November 8, 2018 - Version: 1

New approaches for assembly of short-read metagenomic data

Martin Ayling, Matthew D Clark, Richard M Leggett

https://doi.org/10.7287/peerj.preprints.27332v1

November 12, 2018 - Version: 1

Spiders did not repeatedly gain, but repeatedly lost, foraging webs

Jonathan A Coddington, Ingi Agnarsson, Chris Hamilton, Jason E Bond

https://doi.org/10.7287/peerj.preprints.27341v1

November 20, 2018 - Version: 1

Will innovation solve the global plastic contamination: how much innovation is needed for that?

Mateo Cordier, Takuro Uehara

https://doi.org/10.7287/peerj.preprints.27371v1

November 24, 2018 - Version: 1

Towards predictive biophysical and mechanistic models for disease-causing protein variants

Amelie Stein, Douglas M Fowler, Rasmus Hartmann-Petersen, Kresten Lindorff-Larsen

https://doi.org/10.7287/peerj.preprints.27379v1

November 21, 2018 - Version: 1

A genome-wide analysis of the cellulose synthase-like (Csl) gene family in maize (Zea mays)

Yongkai Li, Xiaojie Cheng, Yaqin Fu, Qinqin Wu, Yuli Guo, Jiayu Peng, Wei Zhang, Bin He

https://doi.org/10.7287/peerj.preprints.27374v1

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