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Hierarchical generalized additive models: an introduction with mgcv

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Wandering around on GitHub (I know, I know) and coming accross this pure gold discussion https://t.co/RoehnxptCm about the order of authors between @ucfagls @noamross @millerdl @ericJpedersen for their awesome paper https://t.co/cf8bgxtQhx on hierarchical GAM & #rstats mgcv
136 days ago
@StatsbyLopez @903124S @friscojosh FWIW, this paper is a nice intro to GAMs w categorical data https://t.co/kmkLCRvpOS one of the co-authors also has a terrific blog w lots of relevant posts: https://t.co/qfO1A8Uw7A
RT @rmaestrem: Hierarchical GAM https://t.co/ZCeD1M5yEo https://t.co/CSybeA23XM
Hierarchical GAM https://t.co/ZCeD1M5yEo https://t.co/CSybeA23XM
RT @noamross: @cbahlai This paper: https://t.co/zCU4j77GkP (should be out this week, I think?), with @ericJpedersen, @millerdl, and @ucfagl…
417 days ago
@cbahlai This paper: https://t.co/zCU4j77GkP (should be out this week, I think?), with @ericJpedersen, @millerdl, and @ucfagls, all of whom I first met on Twitter, has its origin in this stackexchange Q of mine: https://t.co/OIh9KJoOJ8
422 days ago
RT @fasiolo1985: @Chicco_Stat @contefranz What about this https://t.co/RHze9ez84C and for more details see also https://t.co/GktkY980ky
@Chicco_Stat @contefranz What about this https://t.co/RHze9ez84C and for more details see also https://t.co/GktkY980ky
RT @ucfagls: Our[*] Hierarchical GAMs paper is now up on @PeerJPreprints: Hierarchical generalized additive models: an introduction with…
RT @smwindecker: had so much fun breaking down hierarchical GAMs for the first @qaecology reading group of the year. thank you @ericJpeders…
477 days ago
RT @smwindecker: had so much fun breaking down hierarchical GAMs for the first @qaecology reading group of the year. thank you @ericJpeders…
RT @smwindecker: had so much fun breaking down hierarchical GAMs for the first @qaecology reading group of the year. thank you @ericJpeders…
478 days ago
RT @smwindecker: had so much fun breaking down hierarchical GAMs for the first @qaecology reading group of the year. thank you @ericJpeders…
RT @smwindecker: had so much fun breaking down hierarchical GAMs for the first @qaecology reading group of the year. thank you @ericJpeders…
478 days ago
RT @smwindecker: had so much fun breaking down hierarchical GAMs for the first @qaecology reading group of the year. thank you @ericJpeders…
RT @smwindecker: had so much fun breaking down hierarchical GAMs for the first @qaecology reading group of the year. thank you @ericJpeders…
RT @smwindecker: had so much fun breaking down hierarchical GAMs for the first @qaecology reading group of the year. thank you @ericJpeders…
RT @smwindecker: had so much fun breaking down hierarchical GAMs for the first @qaecology reading group of the year. thank you @ericJpeders…
RT @smwindecker: had so much fun breaking down hierarchical GAMs for the first @qaecology reading group of the year. thank you @ericJpeders…
478 days ago
RT @smwindecker: had so much fun breaking down hierarchical GAMs for the first @qaecology reading group of the year. thank you @ericJpeders…
RT @smwindecker: had so much fun breaking down hierarchical GAMs for the first @qaecology reading group of the year. thank you @ericJpeders…
RT @smwindecker: had so much fun breaking down hierarchical GAMs for the first @qaecology reading group of the year. thank you @ericJpeders…
478 days ago
RT @smwindecker: had so much fun breaking down hierarchical GAMs for the first @qaecology reading group of the year. thank you @ericJpeders…
had so much fun breaking down hierarchical GAMs for the first @qaecology reading group of the year. thank you @ericJpedersen @millerdl @ucfagls and @noamross =) we especially loved the mix of explanation and #rstats check it out if you haven't already https://t.co/JKkakcxoQk
@WetlandWiggy These might be helpful: https://t.co/mto0GEkicI and https://t.co/jG58yw0ogP. I usually see GAM results presented visually, with specific sections referred to in the text, and that's what I have done for my own work.
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Supplemental Information

Supplementary tutorial code to reproduce examples in text

DOI: 10.7287/peerj.preprints.27320v1/supp-1

Additional Information

Competing Interests

Eric Pedersen is an employee of Fisheries and Oceans Canada, and Noam Ross is employed by Ecohealth Alliance, a non-profit organization.

Author Contributions

Eric J Pedersen conceived and designed the experiments, performed the experiments, analyzed the data, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

David L. Miller conceived and designed the experiments, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Gavin L. Simpson conceived and designed the experiments, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Noam Ross conceived and designed the experiments, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Data Deposition

The following information was supplied regarding data availability:

All data and code for this paper are available via Github at:

https://github.com/noamross/mixed-effect-gams

Funding

This work was partially funded by Fisheries and Oceans Canada, National Science and Engineering Research Council of Canada (NSERC) Discovery Grant (RGPIN-2014-04032) and by OPNAV N45 and the SURTASS LFA Settlement Agreement, managed by the U.S. Navy's Living Marine Resources program under Contract No. N39430-17-C-1982. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.


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