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January 2016

Table of Contents - PeerJ (Biology Articles)

Long-tailed Finch

January 5, 2016

Does social monogamy mean genetic monogamy in the long-tailed finch?

Researchers present the first molecular data on the genetic breeding system of the Australian long-tailed finch.

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January 28, 2016

AMAS: a fast tool for alignment manipulation and computing of summary statistics

Marek L. Borowiec

https://doi.org/10.7717/peerj.1660 PubMed 26835189

January 19, 2016

Characterisation of the human uterine microbiome in non-pregnant women through deep sequencing of the V1-2 region of the 16S rRNA gene

Hans Verstraelen, Ramiro Vilchez-Vargas, Fabian Desimpel, Ruy Jauregui, Nele Vankeirsbilck, Steven Weyers, Rita Verhelst, Petra De Sutter, Dietmar H. Pieper, Tom Van De Wiele

https://doi.org/10.7717/peerj.1602 PubMed 26823997

January 21, 2016

Cross-platform normalization of microarray and RNA-seq data for machine learning applications

Jeffrey A. Thompson, Jie Tan, Casey S. Greene

https://doi.org/10.7717/peerj.1621 PubMed 26844019

January 12, 2016

Fibroblast growth factors as tissue repair and regeneration therapeutics

Quentin M. Nunes, Yong Li, Changye Sun, Tarja K. Kinnunen, David G. Fernig

https://doi.org/10.7717/peerj.1535 PubMed 26793421

January 21, 2016

Revisiting the Zingiberales: using multiplexed exon capture to resolve ancient and recent phylogenetic splits in a charismatic plant lineage

Chodon Sass, William J.D. Iles, Craig F. Barrett, Selena Y. Smith, Chelsea D. Specht

https://doi.org/10.7717/peerj.1584 PubMed 26819846

January 26, 2016

Generating optimal control simulations of musculoskeletal movement using OpenSim and MATLAB

Leng-Feng Lee, Brian R. Umberger

https://doi.org/10.7717/peerj.1638 PubMed 26835184

January 7, 2016

Impact of demographics on human gut microbial diversity in a US Midwest population

Jun Chen, Euijung Ryu, Matthew Hathcock, Karla Ballman, Nicholas Chia, Janet E Olson, Heidi Nelson

https://doi.org/10.7717/peerj.1514 PubMed 26839739

January 28, 2016

Analysis of five complete genome sequences for members of the class Peribacteria in the recently recognized Peregrinibacteria bacterial phylum

Karthik Anantharaman, Christopher T. Brown, David Burstein, Cindy J. Castelle, Alexander J. Probst, Brian C. Thomas, Kenneth H. Williams, Jillian F. Banfield

https://doi.org/10.7717/peerj.1607 PubMed 26844018

January 19, 2016

Arthropods of the great indoors: characterizing diversity inside urban and suburban homes

Matthew A. Bertone, Misha Leong, Keith M. Bayless, Tara L.F. Malow, Robert R. Dunn, Michelle D. Trautwein

https://doi.org/10.7717/peerj.1582 PubMed 26819844

January 5, 2016

Marine microbial communities of the Great Barrier Reef lagoon are influenced by riverine floodwaters and seasonal weather events

Florent E. Angly, Candice Heath, Thomas C. Morgan, Hemerson Tonin, Virginia Rich, Britta Schaffelke, David G. Bourne, Gene W. Tyson

https://doi.org/10.7717/peerj.1511 PubMed 26839738

January 18, 2016

The Iflaviruses Sacbrood virus and Deformed wing virus evoke different transcriptional responses in the honeybee which may facilitate their horizontal or vertical transmission

Eugene V. Ryabov, Jessica M. Fannon, Jonathan D. Moore, Graham R. Wood, David J. Evans