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Supplemental Information

vcf results for SRR098416

variant call results off running GATK and Sentieon pipelines on sample SRR098416

DOI: 10.7287/peerj.preprints.1672v2/supp-1

vcf results for SRR742200

variant call results off running GATK and Sentieon pipelines on sample

DOI: 10.7287/peerj.preprints.1672v2/supp-2

vcf results for SRR702068

variant call results off running GATK and Sentieon pipelines on sample SRR702068

DOI: 10.7287/peerj.preprints.1672v2/supp-3

Additional Information

Competing Interests

Rafael Aldana and Brendan Gallagher are employed by Sentieon Inc. Rafael Aldana from Sentieon helped design the experiment and write the shell scripts to drive it, and helped write the manuscript. Brendan Gallagher helped write the manuscript. Sentieon Inc. agreed to publish the results.

Author Contributions

Jessica A. Weber conceived and designed the experiments, performed the experiments, analyzed the data, wrote the paper, prepared figures and/or tables, reviewed drafts of the paper.

Rafael Aldana conceived and designed the experiments, performed the experiments, analyzed the data, wrote the paper, prepared figures and/or tables, reviewed drafts of the paper.

Brendan D. Gallagher wrote the paper, reviewed drafts of the paper.

Jeremy S. Edwards analyzed the data, wrote the paper, reviewed drafts of the paper.

Data Deposition

The following information was supplied regarding data availability:

The raw data sets are publicly available. They were processed with both GATK best practices and Sentieon DNAseq to produce vcf files.

Funding

The authors received no funding for this work.


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