PeerJ Author

1,840 Points

Contributions by role

Contributions by subject area

Alexandre Antonelli

PeerJ Author

Summary

Current positions
Full Professor, Department of Biological and Environmental Sciences, University of Gothenburg
Visiting Professor, Harvard University
Director, Gothenburg Global Biodiversity Centre
Scientific Curator, Gothenburg Botanical Garden

Biodiversity Biogeography Bioinformatics Ecology Evolutionary Studies Genomics Taxonomy

Past or current institution affiliations

Harvard University

University of Oxford

University of Gothenburg

Work details

Professor

University of Gothenburg

July 2015

Biological and Environmental Sciences

Visiting Professor

Harvard University

January 2018

Organismic and Evolutionary Biology

Director

Gothenburg Global Biodiversity Centre

January 2017

Websites

September 28, 2020

No one-size-fits-all solution to clean GBIF

Alexander Zizka, Fernanda Antunes Carvalho, Alice Calvente, Mabel Rocio Baez-Lizarazo, Andressa Cabral, Jéssica Fernanda Ramos Coelho, Matheus Colli-Silva, Mariana Ramos Fantinati, Moabe F. Fernandes, Thais Ferreira-Araújo, Fernanda Gondim Lambert Moreira, Nathália Michellyda Cunha Santos, Tiago Andrade Borges Santos, Renata Clicia dos Santos-Costa, Filipe C. Serrano, Ana Paula Alves da Silva, Arthur de Souza Soares, Paolla Gabryelle Cavalcante de Souza, Eduardo Calisto Tomaz, Valéria Fonseca Vale, Tiago Luiz Vieira, Alexandre Antonelli

https://doi.org/10.7717/peerj.9916 PubMed 33062422

January 28, 2020

The Global Museum: natural history collections and the future of evolutionary science and public education

Freek T. Bakker, Alexandre Antonelli, Julia A. Clarke, Joseph A. Cook, Scott V. Edwards, Per G.P. Ericson, Søren Faurby, Nuno Ferrand, Magnus Gelang, Rosemary G. Gillespie, Martin Irestedt, Kennet Lundin, Ellen Larsson, Pável Matos-Maraví, Johannes Müller, Ted von Proschwitz, George K. Roderick, Alexander Schliep, Niklas Wahlberg, John Wiedenhoeft, Mari Källersjö

https://doi.org/10.7717/peerj.8225 PubMed 32025365

April 30, 2019

Biodiversity seen through the perspective of insects: 10 simple rules on methodological choices and experimental design for genomic studies

Pável Matos-Maraví, Camila Duarte Ritter, Christopher J. Barnes, Martin Nielsen, Urban Olsson, Niklas Wahlberg, Daniel Marquina, Ilari Sääksjärvi, Alexandre Antonelli

https://doi.org/10.7717/peerj.6727 PubMed 31106048

February 14, 2019

Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics

Gustavo A. Bravo, Alexandre Antonelli, Christine D. Bacon, Krzysztof Bartoszek, Mozes P. K. Blom, Stella Huynh, Graham Jones, L. Lacey Knowles, Sangeet Lamichhaney, Thomas Marcussen, Hélène Morlon, Luay K. Nakhleh, Bengt Oxelman, Bernard Pfeil, Alexander Schliep, Niklas Wahlberg, Fernanda P. Werneck, John Wiedenhoeft, Sandi Willows-Munro, Scott V. Edwards

https://doi.org/10.7717/peerj.6399 PubMed 30783571

October 4, 2018

Conceptual and empirical advances in Neotropical biodiversity research

Alexandre Antonelli, María Ariza, James Albert, Tobias Andermann, Josué Azevedo, Christine Bacon, Søren Faurby, Thais Guedes, Carina Hoorn, Lúcia G. Lohmann, Pável Matos-Maraví, Camila D. Ritter, Isabel Sanmartín, Daniele Silvestro, Marcelo Tejedor, Hans ter Steege, Hanna Tuomisto, Fernanda P. Werneck, Alexander Zizka, Scott V. Edwards

https://doi.org/10.7717/peerj.5644 PubMed 30310740

September 25, 2018

High-throughput metabarcoding reveals the effect of physicochemical soil properties on soil and litter biodiversity and community turnover across Amazonia

Camila D. Ritter, Alexander Zizka, Fabian Roger, Hanna Tuomisto, Christopher Barnes, R. Henrik Nilsson, Alexandre Antonelli

https://doi.org/10.7717/peerj.5661 PubMed 30280033

July 19, 2018

A novel approach to study the morphology and chemistry of pollen in a phylogenetic context, applied to the halophytic taxon Nitraria L.(Nitrariaceae)

Amber Woutersen, Phillip E. Jardine, Raul Giovanni Bogotá-Angel, Hong-Xiang Zhang, Daniele Silvestro, Alexandre Antonelli, Elena Gogna, Roy H.J. Erkens, William D. Gosling, Guillaume Dupont-Nivet, Carina Hoorn

https://doi.org/10.7717/peerj.5055 PubMed 30038851

July 13, 2018

SECAPR—a bioinformatics pipeline for the rapid and user-friendly processing of targeted enriched Illumina sequences, from raw reads to alignments

Tobias Andermann, Ángela Cano, Alexander Zizka, Christine Bacon, Alexandre Antonelli

https://doi.org/10.7717/peerj.5175 PubMed 30023140

June 15, 2018

The use of chloroplast genome sequences to solve phylogenetic incongruences in Polystachya Hook (Orchidaceae Juss)

Narjara Lopes de Abreu, Ruy José Válka Alves, Sérgio Ricardo Sodré Cardoso, Yann J.K. Bertrand, Filipe Sousa, Climbiê Ferreira Hall, Bernard E. Pfeil, Alexandre Antonelli

https://doi.org/10.7717/peerj.4916 PubMed 29922511

March 16, 2018

Evolutionary persistence in Gunnera and the contribution of southern plant groups to the tropical Andes biodiversity hotspot

Christine D. Bacon, Francisco J. Velásquez-Puentes, Luis Felipe Hinojosa, Thomas Schwartz, Bengt Oxelman, Bernard Pfeil, Mary T.K. Arroyo, Livia Wanntorp, Alexandre Antonelli

https://doi.org/10.7717/peerj.4388 PubMed 29576938

September 18, 2019 - Version: 1

A guide to carrying out a phylogenomic target sequence capture project

Tobias Andermann, Maria Fernanda Torres Jimenez, Pável Matos-Maraví, Romina Batista, José L Blanco-Pastor, A. Lovisa S Gustafsson, Logan Kistler, Isabel M Liberal, Bengt Oxelman, Christine D Bacon, Alexandre Antonelli

https://doi.org/10.7287/peerj.preprints.27968v1

May 30, 2019 - Version: 1

Why mountains matter for biodiversity

Allison Perrigo, Carina Hoorn, Alexandre Antonelli

https://doi.org/10.7287/peerj.preprints.27768v1

April 19, 2019 - Version: 1

The Global Museum: natural history collections and the future of evolutionary biology and public education

Freek T. Bakker, Alexandre Antonelli, Julia Clarke, Joseph A Cook, Scott V Edwards, Per GP Ericson, Søren Faurby, Nuno Ferrand, Magnus Gelang, Rosemary G Gillespie, Martin Irestedt, Kennet Lundin, Ellen Larsson, Pável Matos-Maraví, Johannes Müller, Ted von Proschwitz, George K Roderick, Alexander Schliep, Niklas Wahlberg, John Wiedenhoeft, Mari Källersjö

https://doi.org/10.7287/peerj.preprints.27666v1

March 1, 2019 - Version: 3

Biodiversity seen through the perspective of insects: 10 simple rules on methodological choices and experimental design for genomic studies

Pável Matos-Maraví, Camila Duarte Ritter, Christopher J Barnes, Martin Nielsen, Urban Olsson, Niklas Wahlberg, Daniel Marquina, Ilari Sääksjärvi, Alexandre Antonelli

https://doi.org/10.7287/peerj.preprints.26661v3

June 28, 2018 - Version: 1

High-throughput metabarcoding reveals the effect of physicochemical soil properties on soil and litter biodiversity and community turnover across Amazonia

Camila D Ritter, Alexander Zizka, Fabian Roger, Hanna Tuomisto, Christopher Barnes, R. Henrik Nilsson, Alexandre Antonelli

https://doi.org/10.7287/peerj.preprints.27012v1

February 16, 2018 - Version: 1

The use of next generation sequencing to solve phylogenetic incongruences in Orchidaceae Juss

Narjara Lopes de Abreu, Ruy José Válka Alves, Sérgio Ricardo Sodré Cardoso, Yann JK Bertrand, Filipe Sousa, Climbiê Ferreira Hall, Bernard E Pfeil, Alexandre Antonelli

https://doi.org/10.7287/peerj.preprints.26530v1

February 13, 2018 - Version: 3

SECAPR - A bioinformatics pipeline for the rapid and user-friendly processing of Illumina sequences, from raw reads to alignments

Tobias Andermann, Angela Cano, Alexander Zizka, Christine Bacon, Alexandre Antonelli

https://doi.org/10.7287/peerj.preprints.26477v3

January 30, 2018 - Version: 3

Embracing heterogeneity: Building the Tree of Life and the future of phylogenomics

Gustavo A Bravo, Alexandre Antonelli, Christine D Bacon, Krzysztof Bartoszek, Mozes Blom, Stella Huynh, Graham Jones, L. Lacey Knowles, Sangeet Lamichhaney, Thomas Marcussen, Hélène Morlon, Luay Nakhleh, Bengt Oxelman, Bernard Pfeil, Alexander Schliep, Niklas Wahlberg, Fernanda Werneck, John Wiedenhoeft, Sandi Willows-Munro, Scott V Edwards

https://doi.org/10.7287/peerj.preprints.26449v3

October 6, 2017 - Version: 1

Evolutionary persistence in Gunnera and the contribution of southern plant groups to the tropical Andes biodiversity hotspot

Christine D. Bacon, Francisco Velásquez-Puentes, Luis Felipe Hinojosa, Thomas Schwartz, Bengt Oxelman, Bernard Pfeil, Mary T. K. Arroyo, Livia Wanntorp, Alexandre Antonelli

https://doi.org/10.7287/peerj.preprints.3330v1

July 6, 2017 - Version: 1

Conceptual and empirical advances in Neotropical biodiversity research

Alexandre Antonelli, María Ariza, James Albert, Tobias Andermann, Josué Azevedo, Christine Bacon, Søren Faurby, Thais Guedes, Carina Hoorn, Lucia Lohmann, Pavel Matos-Maraví, Camila Ritter, Isabel Sanmartín, Daniele Silvestro, Marcelo Tejedor, Hans ter Steege, Hanna Tuomisto, Fernanda Werneck, Alexander Zizka, Scott Edwards

https://doi.org/10.7287/peerj.preprints.3074v1

September 15, 2014 - Version: 1

SUPERSMART: ecology and evolution in the era of big data

Alexandre Antonelli, Fabien L. Condamine, Hannes Hettling, Karin Nilsson, R Henrik Nilsson, Bengt Oxelman, Michael J Sanderson, Hervé Sauquet, Ruud Scharn, Daniele Silvestro, Mats Töpel, Rutger A Vos

https://doi.org/10.7287/peerj.preprints.501v1