PeerJ Preprints - Table of Contents

July 15, 2015 - Version: 1

Angiosperm Phylogeny Group (APG) in jeopardy – Where have the flowers gone?

Theodor C. H. Cole

https://doi.org/10.7287/peerj.preprints.1238v1

July 3, 2015 - Version: 1

Goal-oriented evaluation of species distribution models’ accuracy and precision: True Skill Statistic profile and uncertainty maps

Alejandro Ruete, Gerardo C Leynaud

https://doi.org/10.7287/peerj.preprints.1208v1

July 10, 2015 - Version: 2

A standardized, extensible framework for optimizing classification improves marker-gene taxonomic assignments

Nicholas A Bokulich, Jai Ram Rideout, Evguenia Kopylova, Evan Bolyen, Jessica Patnode, Zach Ellett, Daniel McDonald, Benjamin Wolfe, Corinne F Maurice, Rachel J Dutton, Peter J Turnbaugh, Rob Knight, J Gregory Caporaso

https://doi.org/10.7287/peerj.preprints.934v2

July 13, 2015 - Version: 1

2,4-dinitrophenol downregulates genes for diabetes and fatty liver in obese mice

Qian Gao, Jiang He, Tao Liao, Qing-Ping Zeng

https://doi.org/10.7287/peerj.preprints.1229v1

July 20, 2015 - Version: 1

Efficiently extracting full parse trees using regular expressions with capture groups

Niko Schwarz, Aaron Karper, Oscar Nierstrasz

https://doi.org/10.7287/peerj.preprints.1248v1

July 31, 2015 - Version: 1

Anvi’o: An advanced analysis and visualization platform for ‘omics data

A. Murat Eren, Özcan C Esen, Christopher Quince, Joseph H Vineis, Mitchell L Sogin, Tom O Delmont

https://doi.org/10.7287/peerj.preprints.1275v1

July 20, 2015 - Version: 1

Effects of phenolic antioxidants extraction from four selected seaweeds obtained from Sabah

Carmen Wai Foong Fu, Chun Wai Ho, Wilson Thau Lym Yong, Faridah Abas, Chin Ping Tan

https://doi.org/10.7287/peerj.preprints.1249v1

July 8, 2015 - Version: 2

On the impact of sampling frequency on software energy measurements

Rubén Saborido, Venera Venera Arnaoudova, Giovanni Beltrame, Foutse Khomh, Giuliano Antoniol

https://doi.org/10.7287/peerj.preprints.1219v2

July 27, 2015 - Version: 2

What do programmers know about the energy consumption of software?

Candy Pang, Abram Hindle, Bram Adams, Ahmed E Hassan

https://doi.org/10.7287/peerj.preprints.886v2

July 26, 2015 - Version: 1

Superchords: decoding EEG signals in the millisecond range

Rogerio Normand, Hugo Alexandre Ferreira

https://doi.org/10.7287/peerj.preprints.1265v1

July 10, 2015 - Version: 1

Improving Brill's tagger lexical and transformation rule for Afaan Oromo language

Abraham G Ayana

https://doi.org/10.7287/peerj.preprints.1225v1

July 1, 2015 - Version: 1

Evidence for embodied predictive coding: the anterior insula coordinates cortical processing of tactile deviancy

Micah Allen, Francesca Fardo, Martin Dietz, Hauke F Hillebrandt, Geraint Rees, Andreas Roepstorff

https://doi.org/10.7287/peerj.preprints.1203v1

July 13, 2015 - Version: 1

A transcriptome resource for the coral, Orbicella faveolata (Scleractinia-Meruliniidae) – an emerging model of coral innate immunity

David A Anderson, Marcus E Walz, Ernesto Weil, Peter Tonellato, Matthew C Smith

https://doi.org/10.7287/peerj.preprints.1230v1

July 26, 2015 - Version: 1

My flipped classroom: what I did and how I did it

Jan H. Jensen

https://doi.org/10.7287/peerj.preprints.1262v1

July 2, 2015 - Version: 2

The blurred line between form and process: a comparison of stream classification frameworks

Alan Kasprak, Nate Hough-Snee, Tim Beechie, Nicolaas Bouwes, Gary J. Brierley, Reid Camp, Kirstie A. Fryirs, Hiroo Imaki, Martha L. Jensen, Gary O'Brien, David L. Rosgen, Joseph M. Wheaton

https://doi.org/10.7287/peerj.preprints.885v2

July 10, 2015 - Version: 2

Swarm v2: highly-scalable and high-resolution amplicon clustering

Frédéric Mahé, Torbjørn Rognes, Christopher Quince, Colomban de Vargas, Micah Dunthorn

https://doi.org/10.7287/peerj.preprints.1222v2

July 6, 2015 - Version: 1

A rapid assessment of logging effects on bird species in Kelantan forests areas, Malaysia

Saber Ghasemi

https://doi.org/10.7287/peerj.preprints.1215v1

July 21, 2015 - Version: 1

Implanted intracortical electrodes as chronic neural interfaces to the central nervous system

Peter Henderson

https://doi.org/10.7287/peerj.preprints.1255v1

July 21, 2015 - Version: 1

Inter simple sequence repeats (ISSRs): Neglected DNA markers for molecular dissection of Plasmodium species in long-tailed Macaque (Macaca fascicularis)

Parastoo Khajeaian, Soon Guan Tan, Alireza Valdiani, Christina Seok Yien Yong, Mohammad Zareian Jahromi, Noorjahan Banu Alitheen, Jeffrine Japning Rovie-Ryan

https://doi.org/10.7287/peerj.preprints.1253v1

July 9, 2015 - Version: 1

Urban/rural disparities in cancer incidence in New York State, 2008-2012

Timothy Conwell, Francis P Boscoe

https://doi.org/10.7287/peerj.preprints.1224v1

July 1, 2015 - Version: 2

Characteristics of frequent presenters: An analysis of 1 year of data from an Irish Emergency Department

Philip A Walker, Niamh Cummins, Niamh Collins

https://doi.org/10.7287/peerj.preprints.1000v2

July 21, 2015 - Version: 3

Prioritization of actions needed to develop IT skills among healthcare workforce

Sisi Li, Panagiotis D Bamidis, Stathis Konstantinidis, Vicente Traver, Nabil Zary