Taxonomic recognition of some species-level lineages circumscribed in nominal Rhizoplaca subdiscrepans s. lat. (Lecanoraceae, Ascomycota)

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Biodiversity and Conservation

Main article text

 

Introduction

Materials & Methods

Taxon sampling

Morphological and chemical study

Molecular methods: DNA extraction, PCR amplification and DNA sequencing

Alignment assembly and molecular phylogenetic analyses

Results

Taxonomy

New combination

Discussion

Conclusions

Supplemental Information

New sequence data used in the study recently submitted in NCBI, not published

DOI: 10.7717/peerj.9555/supp-1

Additional Information and Declarations

Competing Interests

The authors declare there are no competing interests.

Author Contributions

Katarzyna Szczepańska conceived and designed the experiments, performed the experiments, analyzed the data, prepared figures and/or tables, authored or reviewed drafts of the paper, and approved the final draft.

Jacek Urbaniak and Lucyna Śliwa performed the experiments, analyzed the data, prepared figures and/or tables, authored or reviewed drafts of the paper, and approved the final draft.

DNA Deposition

The following information was supplied regarding the deposition of DNA sequences:

The ITS sequences are available at GenBank: MN931719 to MN931739.

The GenBank accession number, species, and location of the specimen (herbarium collection number) of each studied specimen are as follows:

MN931719 Protoparmeliopsis muralis, Szczepańska 1263 (hb. Szczepańska)

MN931720 Rhizoplaca opiniconensis, Brodo 25117 (CANL) Canadian Museum of Nature

MN931721 Rhizoplaca opiniconensis, Wetmore 88134 (MIN) University of Minnesota

MN931722 Rhizoplaca opiniconensis, Wetmore 74475 (MIN)

MN931728 Rhizoplaca phaedrophthalma, Ryan 31877 (ASU) Arizona State University

MN931729 Rhizoplaca phaedrophthalma, Ryan 31889 (ASU)

MN931730 Rhizoplaca phaedrophthalma, Ryan 32870 (ASU)

MN931732 Rhizoplaca phaedrophthalma, Wetmore 80571 (MIN)

MN931726 Rhizoplaca phaedrophthalma, Wetmore 80979 (MIN)

MN931723 Rhizoplaca phaedrophthalma, Wetmore 95059 (MIN)

MN931724 Rhizoplaca phaedrophthalma, Wetmore 5101 (MIN)

MN931731 Rhizoplaca phaedrophthalma, Wetmore 80866 (MIN)

MN931725 Rhizoplaca phaedrophthalma, Wetmore 81235 (MIN)

MN931727 Rhizoplaca phaedrophthalma, Wetmore 81446 (MIN)

MN931734 Rhizoplaca pseudomellea, Wetmore 51151 (MIN)

MN931735 Rhizoplaca pseudomellea, Ryan 24402 (MIN)

MN931736 Rhizoplaca pseudomellea, Wetmore 95079 (MIN)

MN931737 Rhizoplaca pseudomellea, Wetmore 95084 (MIN)

MN931733 Rhizoplaca pseudomellea, Ryan 28456 (ASU)

MN931738 Rhizoplaca subdiscrepans, Szczepańska 923 (KRAM)

MN931739 Rhizoplaca subdiscrepans, Szczepańska 967 (KRAM) W. Szafer Institute of Botany, Polish Academy of Sciences.

Data Availability

The following information was supplied regarding data availability:

The alignment of ITS sequences are available at TreeBASE: http://purl.org/phylo/treebase/phylows/study/TB2:S26365?x-access-code=cecc71c8fa6e3378ec581a812b7b976b&format=html.

Funding

This work was supported by statutory funds of Wroclaw University of Environmental and Life Sciences and its Leading Research Groups support project (2020–2025, Art. 387/3) as well as by statutory funds of the W. Szafer Institute of Botany, Polish Academy of Sciences and National Science Centre, Poland, project 2016/21/B/NZ8/02463 granted to LS̀. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

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