Visitors   Views   Downloads

Virus discovery in all three major lineages of terrestrial arthropods highlights the diversity of single-stranded DNA viruses associated with invertebrates

View preprint
RT @virome_girl: Our first preprint @thePeerJ - thanks for the encouragement towards preprints tweeps. Circular ssDNA viruses in terrestria…
RT @phy_papers: PJpreprint: Virus discovery in all three major lineages of terrestrial arthropods highlights the diversity of single-strand…
RT @virome_girl: Our first preprint @thePeerJ - thanks for the encouragement towards preprints tweeps. Circular ssDNA viruses in terrestria…
RT @virome_girl: Our first preprint @thePeerJ - thanks for the encouragement towards preprints tweeps. Circular ssDNA viruses in terrestria…
RT @virome_girl: Our first preprint @thePeerJ - thanks for the encouragement towards preprints tweeps. Circular ssDNA viruses in terrestria…
RT @virome_girl: Our first preprint @thePeerJ - thanks for the encouragement towards preprints tweeps. Circular ssDNA viruses in terrestria…
RT @phy_papers: PJpreprint: Virus discovery in all three major lineages of terrestrial arthropods highlights the diversity of single-strand…
RT @virome_girl: Our first preprint @thePeerJ - thanks for the encouragement towards preprints tweeps. Circular ssDNA viruses in terrestria…
RT @virome_girl: Our first preprint @thePeerJ - thanks for the encouragement towards preprints tweeps. Circular ssDNA viruses in terrestria…
RT @virome_girl: Our first preprint @thePeerJ - thanks for the encouragement towards preprints tweeps. Circular ssDNA viruses in terrestria…
937 days ago
RT @virome_girl: Our first preprint @thePeerJ - thanks for the encouragement towards preprints tweeps. Circular ssDNA viruses in terrestria…
RT @rnomics: Virus discovery in all three major lineages of terrestrial arthropods highlights the diversity of single-stranded DNA viruses…
RT @virome_girl: Our first preprint @thePeerJ - thanks for the encouragement towards preprints tweeps. Circular ssDNA viruses in terrestria…
RT @virome_girl: Our first preprint @thePeerJ - thanks for the encouragement towards preprints tweeps. Circular ssDNA viruses in terrestria…
RT @virome_girl: Our first preprint @thePeerJ - thanks for the encouragement towards preprints tweeps. Circular ssDNA viruses in terrestria…
RT @virome_girl: Our first preprint @thePeerJ - thanks for the encouragement towards preprints tweeps. Circular ssDNA viruses in terrestria…
Our first preprint @thePeerJ - thanks for the encouragement towards preprints tweeps. Circular ssDNA viruses in terrestrial arthropods - https://t.co/LzDzJVwD1O Lots of great folks involved including @Varsani_lab and the spider goddess @Cataranea (who I only know thru Twitter!)
RT @rnomics: Virus discovery in all three major lineages of terrestrial arthropods highlights the diversity of single-stranded DNA viruses…
Virus discovery in all three major lineages of terrestrial arthropods highlights the diversity of single-stranded DNA viruses associated with invertebrates https://t.co/l9HlIMS6GT Viruses encoding a replication-associated protein (Rep) within a covalently closed, singl…
938 days ago
PJpreprint: Virus discovery in all three major lineages of terrestrial arthropods highlights the diversity of single-stranded DNA viruses associated with invertebrates https://t.co/NMX9ep4K9y
938 days ago
Virus discovery in all three major lineages of terrestrial arthropods highlights the diversity of single-stranded DNA viruses associated with invertebrates https://t.co/PSmLAa4wuc
NOT PEER-REVIEWED
"PeerJ Preprints" is a venue for early communication or feedback before peer review. Data may be preliminary.

A peer-reviewed article of this Preprint also exists.

View peer-reviewed version

Supplemental Information

Alignment used to create approximately maximum likelihood tree shown in Figure 1 in fasta format

Alignment used to create approximately maximum likelihood tree shown in Figure 1 in fasta format. Details regarding sequence acronyms, descriptions, and accession numbers can be found in Supplemental Data S2.

DOI: 10.7287/peerj.preprints.27093v1/supp-1

Excel workbook containing three worksheets (W#) with details on intrinsically disordered protein (IDP) profiles, sequences used for Figure 1, accession numbers of non-CRESS DNA molecules

Excel workbook containing three worksheets (W#) with the following information: details regarding intrinsically disordered protein (IDP) profiles (W1), detailed information for sequences found in the alignment used to create approximately maximum likelihood tree shown in Figure 1 (Data S1) (W2), and a table listing accession numbers and information regarding non-CRESS DNA molecules detected in terrestrial arthropods (W3).

DOI: 10.7287/peerj.preprints.27093v1/supp-2

Additional Information

Competing Interests

Mya Breitbart is an Academic Editor for PeerJ. The authors declare that they have no competing interests.

Author Contributions

Karyna Rosario conceived and designed the experiments, performed the experiments, analyzed the data, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Kaitlin A Mettel performed the experiments, approved the final draft.

Bayleigh E Benner performed the experiments, approved the final draft.

Ryan Johnson performed the experiments, approved the final draft.

Catherine Scott contributed reagents/materials/analysis tools, approved the final draft.

Sohath Z Yusseff-Vanegas contributed reagents/materials/analysis tools, approved the final draft.

Christopher CM Baker contributed reagents/materials/analysis tools, approved the final draft.

Deby L Cassill contributed reagents/materials/analysis tools, approved the final draft.

Caroline Storer contributed reagents/materials/analysis tools, approved the final draft.

Arvind Varsani analyzed the data, prepared figures and/or tables, approved the final draft.

Mya Breitbart conceived and designed the experiments, analyzed the data, prepared figures and/or tables, approved the final draft.

DNA Deposition

The following information was supplied regarding the deposition of DNA sequences:

The genomes and replicons described here are accessible via GenBank accession numbers: MG917674 to MG917677 and MH545497 to MH545543.

Data Deposition

The following information was supplied regarding data availability:

The research in this article did not generate any data or code beyond the genome sequences deposited into Genbank.

Funding

This work was funded through NSF Assembling the Tree of Life Program grant DEB-1239976 to K. Rosario and M. Breitbart. Field work for blow fly collections in the Caribbean was funded through NSF grants DEB-1314749 and DEB-1050253 to I. Agnarsson and G. Binford from the University of Vermont and Lewis & Clark College, respectively. Fungus-farming termites and ant samples from Africa were collected in the course of fieldwork funded by NSF grant DEB-1355122 to C. Tarnita and R. Pringle from Princeton University. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.


Add your feedback

Before adding feedback, consider if it can be asked as a question instead, and if so then use the Question tab. Pointing out typos is fine, but authors are encouraged to accept only substantially helpful feedback.

Some Markdown syntax is allowed: _italic_ **bold** ^superscript^ ~subscript~ %%blockquote%% [link text](link URL)
 
By posting this you agree to PeerJ's commenting policies