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December 2021

Table of Contents - PeerJ (Biology Articles)

December 16, 2021

Zoledronic acid promotes osteoclasts ferroptosis by inhibiting FBXO9-mediated p53 ubiquitination and degradation

Xingzhou Qu, Zhaoqi Sun, Yang Wang, Hui Shan Ong

https://doi.org/10.7717/peerj.12510 PubMed 35003915

December 10, 2021

CRYAB predicts clinical prognosis and is associated with immunocyte infiltration in colorectal cancer

Junsheng Deng, Xiaoli Chen, Ting Zhan, Mengge Chen, Xisheng Yan, Xiaodong Huang

https://doi.org/10.7717/peerj.12578 PubMed 34966587

December 9, 2021

Characterization and expression analysis of the SPL gene family during floral development and abiotic stress in pecan (Carya illinoinensis)

Min Wang, Zhenghai Mo, Ruozhu Lin, Cancan Zhu

https://doi.org/10.7717/peerj.12490 PubMed 34966577

December 15, 2021

ANXA9 as a novel prognostic biomarker associated with immune infiltrates in gastric cancer

Tongtong Zhang, Suyang Yu, Shipeng Zhao

https://doi.org/10.7717/peerj.12605 PubMed 35003923

December 22, 2021

Genome-wide identification and characterization of SPX-domain-containing protein gene family in Solanum lycopersicum

Chunwei Li, Qiuye You, Panfeng Zhao

https://doi.org/10.7717/peerj.12689 PubMed 35036163

December 16, 2021

Ploidy level enhances the photosynthetic capacity of a tetraploid variety of Acer buergerianum Miq.

Yi Wang, Bingyu Jia, Hongjian Ren, Zhen Feng

https://doi.org/10.7717/peerj.12620 PubMed 35003928

December 13, 2021

Overexpression of SKA3 correlates with poor prognosis in female early breast cancer

Yue Zhong, Zhenjie Zhuang, Peiju Mo, Mandi Lin, Jiaqian Gong, Jiarong Huang, Haiyan Mo, Yuyun Lu, Mei Huang

https://doi.org/10.7717/peerj.12506 PubMed 34993016

December 23, 2021

Reinvestigating the phylogeny of Myriapoda with more extensive taxon sampling and novel genetic perspective

Jiajia Wang, Yu Bai, Haifeng Zhao, Ruinan Mu, Yan Dong

https://doi.org/10.7717/peerj.12691 PubMed 35036164

December 17, 2021

Metabarcoding prey DNA from fecal samples of adult dragonflies shows no predicted sex differences, and substantial inter-individual variation, in diets

André Morrill, Kari M. Kaunisto, Julia J. Mlynarek, Ella Sippola, Eero J. Vesterinen, Mark R. Forbes

https://doi.org/10.7717/peerj.12634 PubMed 35003931

December 10, 2021

Taxonomic evaluation of Xylodon (Hymenochaetales, Basidiomycota) in Korea and sequence verification of the corresponding species in GenBank

Yoonhee Cho, Ji Seon Kim, Yu-Cheng Dai, Yusufjon Gafforov, Young Woon Lim

https://doi.org/10.7717/peerj.12625 PubMed 34966599

December 20, 2021

A novel machine learning derived RNA-binding protein gene–based score system predicts prognosis of hepatocellular carcinoma patients

Qiangnu Zhang, Yusen Zhang, Yusheng Guo, Honggui Tang, Mingyue Li, Liping Liu

https://doi.org/10.7717/peerj.12572 PubMed 35036125

December 24, 2021

Integrated analysis and the identification of a circRNA-miRNA-mRNA network in the progression of abdominal aortic aneurysm

Ke Si, Da Lu, Jianbo Tian

https://doi.org/10.7717/peerj.12682 PubMed 35036156

December 23, 2021

A journey through the Corynebacterium pseudotuberculosis proteome promotes insights into its functional genome

Wanderson Marques da Silva, Nubia Seyffert, Artur Silva, Vasco Azevedo

https://doi.org/10.7717/peerj.12456 PubMed 35036114

December 15, 2021

The cnidarian parasite Ceratonova shasta utilizes inherited and recruited venom-like compounds during infection

Benjamin Americus, Nicole Hams, Anna M. L. Klompen, Gema Alama-Bermejo, Tamar Lotan, Jerri L. Bartholomew, Stephen D. Atkinson

https://doi.org/10.7717/peerj.12606 PubMed 35003924

December 15, 2021

Genome-wide identification, evolution, and expression analysis of the NPR1-like gene family in pears

Yarui Wei, Shuliang Zhao, Na Liu, Yuxing Zhang

https://doi.org/10.7717/peerj.12617 PubMed 35003927

December 14, 2021

Comprehensive analysis of ceRNA network of ERCC4 in colorectal cancer

Huixin Hu, Songyi Liu, Aining Chu, Jing Chen, Chengzhong Xing, Jingjing Jing

https://doi.org/10.7717/peerj.12647 PubMed 34993023

December 14, 2021

The metabolic core of the prokaryotic community from deep-sea sediments of the southern Gulf of Mexico shows different functional signatures between the continental slope and abyssal plain

Mónica Torres-Beltrán, Lluvia Vargas-Gastélum, Dante Magdaleno-Moncayo, Meritxell Riquelme, Juan Carlos Herguera-García, Alejandra Prieto-Davó, Asunción Lago-Lestón

https://doi.org/10.7717/peerj.12474 PubMed 34993013

December 10, 2021

Identification of Theileria spp. in sheep and goats from Jeddah, Saudi Arabia, using molecular techniques

Dina M. Metwally, Reem Alajmi, Muslimah N. Alsulami, Isra M. Al-Turaiki, Rewaida Abdel-Gaber, Afrah F. Alkhuriji, Haleema H. Albohiri, Khalil Mohamed, Hanadi B. Baghdadi, Manal F. El-Khadragy, Guillermo T. Isaias, Saeed El-Ashram

https://doi.org/10.7717/peerj.12596 PubMed 34966592

December 22, 2021

Identification of HMMR as a prognostic biomarker for patients with lung adenocarcinoma via integrated bioinformatics analysis

Zhaodong Li, Hongtian Fei, Siyu Lei, Fengtong Hao, Lijie Yang, Wanze Li, Laney Zhang, Rui Fei

https://doi.org/10.7717/peerj.12624 PubMed 35036134

December 9, 2021

Prognostic values of the core components of the mammalian circadian clock in prostate cancer

Wenchang Yue, Xiao Du, Xuhong Wang, Niu Gui, Weijie Zhang, Jiale Sun, Jiawei You, Dong He, Xinyu Geng, Yuhua Huang, Jianquan Hou

https://doi.org/10.7717/peerj.12539 PubMed 34966582

December 2, 2021

CNV-P: a machine-learning framework for predicting high confident copy number variations

Taifu Wang, Jinghua Sun, Xiuqing Zhang, Wen-Jing Wang, Qing Zhou

https://doi.org/10.7717/peerj.12564 PubMed 34917425

December 23, 2021

ReGSP: a visualized application for homology-based gene searching and plotting using multiple reference sequences

Girum Fitihamlak Ejigu, Gangman Yi, Jong Im Kim, Jaehee Jung

https://doi.org/10.7717/peerj.12707 PubMed 35036172

December 9, 2021

A transcription factor signature predicts the survival of patients with adrenocortical carcinoma

Jianyu Zhao, Bo Liu, Xiaoping Li

https://doi.org/10.7717/peerj.12433 PubMed 34966575

December 10, 2021

Transcriptome atlas of Phalaenopsis equestris

Anna V. Klepikova, Artem S. Kasianov, Margarita A. Ezhova, Aleksey A. Penin, Maria D. Logacheva

https://doi.org/10.7717/peerj.12600 PubMed 34966594

December 22, 2021

Development of a T-cell activation-related module with predictive value for the prognosis and immune checkpoint blockade therapy response in glioblastoma

Zihao Yan, Siwen Chu, Chen Zhu, Yunhe Han, Qingyu Liang, Shuai Shen, Wen Cheng, Anhua Wu

https://doi.org/10.7717/peerj.12547 PubMed 35036121

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