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Fabien Campagne
PeerJ Editor & Author
1,150 Points

Contributions by role

Author 270
Preprint Author 280
Editor 600
Preprint Feedback 15

Contributions by subject area

Bioinformatics
Computational Science
Human-Computer Interaction
Computational Biology
Genomics
Immunology
Nephrology
Medical Genetics
Digital Libraries
Distributed and Parallel Computing
Cognitive Disorders
Neurology

Fabien Campagne

PeerJ Editor & Author

Summary

Assistant Professor at the Weill Cornell Medical College (WCMC). Associate Director, Biomedical Informatics Core, Clinical and Translational Science Center, WCMC. My laboratory specializes on the development of approaches and software tools to enable new discoveries in biology and translational research (e.g., RbDe, GPCR-OKB, Goby, GobyWeb, a few others that did not stick). See http://campagnelab.org for recent projects and biomedical focus.

Bioinformatics Computational Biology Genomics

Editing Journals

PeerJ - the Journal of Life & Environmental Sciences
PeerJ Computer Science

Past or current institution affiliations

Cornell University

Work details

Research Assistant Professor

Weill Cornell Medical College
Institute for Computational Biomedicine

Research Assistant Professor

Physiology and Biophysics
Institute for Computational Biomedicine

Websites

  • Google Scholar

PeerJ Contributions

  • Articles 2
  • Preprints 4
  • Edited 2
  • Feedback 1
  • Questions 2
February 24, 2015
Language workbench user interfaces for data analysis
Victoria M. Benson, Fabien Campagne
https://doi.org/10.7717/peerj.800 PubMed 25755929
January 2, 2014
Composable languages for bioinformatics: the NYoSh experiment
Manuele Simi, Fabien Campagne
https://doi.org/10.7717/peerj.241 PubMed 24482760
December 12, 2015 - Version: 2
MetaR: simple, high-level languages for data analysis with the R ecosystem
Fabien Campagne, William ER Digan, Manuele Simi
https://doi.org/10.7287/peerj.preprints.1465v2
September 27, 2015 - Version: 2
Exome sequencing and prediction of long-term kidney allograft function
Laurent Mesnard, Thangamani Muthukumar, Maren Burbach, Carol Li, Huimin Shang, Darshana Dadhania, John R Lee, Vijay K Sharma, Jenny Xiang, Caroline Suberbielle, Maryvonnick Carmagnat, Nacera Ouali, Eric Rondeau, John J Friedewald, Michael M Abecassis, Manikkam Suthanthiran, Fabien Campagne
https://doi.org/10.7287/peerj.preprints.854v2
January 23, 2015 - Version: 2
Language workbench user interfaces for data analysis
Victoria M Benson, Fabien Campagne
https://doi.org/10.7287/peerj.preprints.511v2
November 25, 2013 - Version: 2
Composable languages for bioinformatics: the NYoSh experiment
Manuele Simi, Fabien Campagne
https://doi.org/10.7287/peerj.preprints.112v2

Academic Editor on

July 19, 2016
fluff: exploratory analysis and visualization of high-throughput sequencing data
Georgios Georgiou, Simon J. van Heeringen
https://doi.org/10.7717/peerj.2209 PubMed 27547532
September 24, 2015
The impact of Docker containers on the performance of genomic pipelines
Paolo Di Tommaso, Emilio Palumbo, Maria Chatzou, Pablo Prieto, Michael L. Heuer, Cedric Notredame
https://doi.org/10.7717/peerj.1273 PubMed 26421241

Provided feedback on

1 vote
27 Nov 2013

Identifying Genetic Interactions Associated with Late-Onset Alzheimer’s Disease

Abstract: PLINK is not a method. It is a software package that implements many methods. You should identify which method you compare to. Line 279: rs429358 (APOE*4). The APOE ep...

2 Questions

0
Comparison of BCM with PLINK (logistic regression)
about Identifying Genetic Interactions Associated with Late-Onset Alzheimer’s Disease
0
Cross-validation to measure predicted pairs
about Identifying Genetic Interactions Associated with Late-Onset Alzheimer’s Disease