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Sujai Kumar
PeerJ Author & Reviewer
275 Points

Contributions by role

Author 135
Preprint Author 70
Reviewer 70
Preprint Feedback 15

Contributions by subject area

Evolutionary Studies
Genomics
Bioinformatics
Microbiology
Zoology

Sujai Kumar

PeerJ Author & Reviewer

Summary

Bioinformatics Computational Science Genomics

Past or current institution affiliations

University of Edinburgh
University of Oxford

Work details

Postdoc

University of Edinburgh
October 2014

Websites

  • GitHub
  • Google Scholar
  • ORCID
  • CV
  • PubMed Search

PeerJ Contributions

  • Articles 1
  • Preprints 1
  • Reviewed 2
  • Feedback 1
  • Questions 1
May 6, 2014
The complex hybrid origins of the root knot nematodes revealed through comparative genomics
David H. Lunt, Sujai Kumar, Georgios Koutsovoulos, Mark L. Blaxter
https://doi.org/10.7717/peerj.356 PubMed 24860695
March 20, 2017 - Version: 2
GenomeHubs: Simple containerised setup of a custom Ensembl database and web server for any species
Richard J Challis, Sujai Kumar, Lewis Stevens, Mark Blaxter
https://doi.org/10.7287/peerj.preprints.2401v2

Signed reviews submitted for articles published in PeerJ Note that some articles may not have the review itself made public unless authors have made them open as well.

September 12, 2017
Challenging a bioinformatic tool’s ability to detect microbial contaminants using in silico whole genome sequencing data
Nathan D. Olson, Justin M. Zook, Jayne B. Morrow, Nancy J. Lin
https://doi.org/10.7717/peerj.3729 PubMed 28924496
June 14, 2016
Characterizing the adult and larval transcriptome of the multicolored Asian lady beetle, Harmonia axyridis
Lindsay A. Havens, Matthew D. MacManes
https://doi.org/10.7717/peerj.2098 PubMed 27326374

Provided feedback on

08 Feb 2016

Identifying contamination with advanced visualization and analysis practices: metagenomic approaches for eukaryotic genome assemblies

Thanks very much for this preprint. I think Anvi'o is a great way to visualise lots of different lines of information and evidence and I definitely want to use it in future genome...

1 Question

0
This assembly should not have been submitted to NCBI as a WGS submission
about Identifying contamination with advanced visualization and analysis practices: metagenomic approaches for eukaryotic genome assemblies