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Tomas Perez-Acle
PeerJ Editor, Author & Reviewer
2,440 Points

Contributions by role

Author 405
Editor 2,035

Contributions by subject area

Bioinformatics
Biophysics
Computational Biology
Genomics
Biotechnology
Mathematical Biology
Epidemiology
Infectious Diseases
Public Health
Computational Science
Biochemistry
Molecular Biology
Parasitology
Global Health
HIV
Neuroscience
Neurology
Evolutionary Studies
Animal Behavior
Drugs and Devices
Pharmacology
Conservation Biology
Ecology
Environmental Sciences
Bioengineering
Cell Biology
Plant Science
Microbiology
Virology

Tomas Perez-Acle

PeerJ Editor, Author & Reviewer

Summary

Biologist, PhD in Biotechnology. Director of the Centro BASAL Ciencia & Vida. Head Researcher of the Computational Biology Lab (dLab) at Fundacion Ciencia & Vida, Santiago, Chile. Research Professor at Facultad de Ingeniería y Tecnología, Universidad San Sebastián.

Agents & Multi-Agent Systems Bioinformatics Biophysics Computational Biology Infectious Diseases Mathematical Biology Network Science & Online Social Networks Social Computing

Editorial Board Member

PeerJ - the Journal of Life & Environmental Sciences

Past or current institution affiliations

Universidad San Sebastián

Work details

Head Researcher

Fundacion Ciencia & Vida
Computational Biology Lab

Websites

  • PubMed Search
  • Microsoft Academic Search
  • Google Scholar
  • Lab Site
  • ResearcherID

PeerJ Contributions

  • Articles 3
  • Edited 17
December 7, 2018
RIP-MD: a tool to study residue interaction networks in protein molecular dynamics
Sebastián Contreras-Riquelme, Jose-Antonio Garate, Tomas Perez-Acle, Alberto J.M. Martin
https://doi.org/10.7717/peerj.5998 PubMed 30568854
February 28, 2017
LoTo: a graphlet based method for the comparison of local topology between gene regulatory networks
Alberto J. Martin, Sebastián Contreras-Riquelme, Calixto Dominguez, Tomas Perez-Acle
https://doi.org/10.7717/peerj.3052 PubMed 28265516
August 5, 2014
Insights on the structure and stability of Licanantase: a trimeric acid-stable coiled-coil lipoprotein from Acidithiobacillus thiooxidans
Fernando Abarca, Sebastian E. Gutierrez-Maldonado, Pilar Parada, Patricio Martinez, Alejandro Maass, Tomas Perez-Acle
https://doi.org/10.7717/peerj.457 PubMed 25165619

Academic Editor on

May 27, 2022
Automatic detection of the parasite Trypanosoma cruzi in blood smears using a machine learning approach applied to mobile phone images
Mauro César Cafundó Morais, Diogo Silva, Matheus Marques Milagre, Maykon Tavares de Oliveira, Thaís Pereira, João Santana Silva, Luciano da F. Costa, Paola Minoprio, Roberto Marcondes Cesar Junior, Ricardo Gazzinelli, Marta de Lana, Helder I. Nakaya
https://doi.org/10.7717/peerj.13470 PubMed 35651746
March 8, 2017
Transcriptomic analysis reveals metabolic switches and surface remodeling as key processes for stage transition in Trypanosoma cruzi
Luisa Berná, Maria Laura Chiribao, Gonzalo Greif, Matias Rodriguez, Fernando Alvarez-Valin, Carlos Robello
https://doi.org/10.7717/peerj.3017 PubMed 28286708
December 21, 2016
Emergent adaptive behaviour of GRN-controlled simulated robots in a changing environment
Yao Yao, Veronique Storme, Kathleen Marchal, Yves Van de Peer
https://doi.org/10.7717/peerj.2812 PubMed 28028477
November 8, 2016
Planning horizon affects prophylactic decision-making and epidemic dynamics
Luis G. Nardin, Craig R. Miller, Benjamin J. Ridenhour, Stephen M. Krone, Paul Joyce, Bert O. Baumgaertner
https://doi.org/10.7717/peerj.2678 PubMed 27843714
June 29, 2016
Virus wars: using one virus to block the spread of another
Matthew L. Paff, Scott L. Nuismer, Andrew Ellington, Ian J. Molineux, James J. Bull
https://doi.org/10.7717/peerj.2166 PubMed 27413636
April 25, 2016
Diversity improves performance in excitable networks
Leonardo L. Gollo, Mauro Copelli, James A. Roberts
https://doi.org/10.7717/peerj.1912 PubMed 27168961
January 5, 2016
Intermediate-term emotional bookkeeping is necessary for long-term reciprocal grooming partner preferences in an agent-based model of macaque groups
Ellen Evers, Han de Vries, Berry M. Spruijt, Elisabeth H.M. Sterck
https://doi.org/10.7717/peerj.1488 PubMed 26839737
December 21, 2015
Artificial neural network cascade identifies multi-P450 inhibitors in natural compounds
Zhangming Li, Yan Li, Lu Sun, Yun Tang, Lanru Liu, Wenliang Zhu
https://doi.org/10.7717/peerj.1524 PubMed 26719820
June 11, 2015
Modelling Tradescantia fluminensis to assess long term survival
Alex James, Sue M. Molloy, Agate Ponder-Sutton, Michael J. Plank, Shona L. Lamoureaux, Graeme W. Bourdôt, Dave Kelly
https://doi.org/10.7717/peerj.1013 PubMed 26082865
May 26, 2015
Evolution of heritable behavioural differences in a model of social division of labour
Zsóka Vásárhelyi, Géza Meszéna, István Scheuring
https://doi.org/10.7717/peerj.977 PubMed 26038732
February 19, 2015
Computational analysis of the LRRK2 interactome
Claudia Manzoni, Paul Denny, Ruth C. Lovering, Patrick A. Lewis
https://doi.org/10.7717/peerj.778 PubMed 25737818
January 13, 2015
DrugOn: a fully integrated pharmacophore modeling and structure optimization toolkit
Dimitrios Vlachakis, Paraskevas Fakourelis, Vasileios Megalooikonomou, Christos Makris, Sophia Kossida
https://doi.org/10.7717/peerj.725 PubMed 25648563
August 19, 2014
Data-driven discovery of the spatial scales of habitat choice by elephants
Andrew F. Mashintonio, Stuart L. Pimm, Grant M. Harris, Rudi J. van Aarde, Gareth J. Russell
https://doi.org/10.7717/peerj.504 PubMed 25177532
July 1, 2014
Automated analysis of invadopodia dynamics in live cells
Matthew E. Berginski, Sarah J. Creed, Shelly Cochran, David W. Roadcap, James E. Bear, Shawn M. Gomez
https://doi.org/10.7717/peerj.462 PubMed 25071988
March 4, 2014
FragBuilder: an efficient Python library to setup quantum chemistry calculations on peptides models
Anders S. Christensen, Thomas Hamelryck, Jan H. Jensen
https://doi.org/10.7717/peerj.277 PubMed 24688855
October 22, 2013
Protein signatures using electrostatic molecular surfaces in harmonic space
C. Sofia Carvalho, Dimitrios Vlachakis, Georgia Tsiliki, Vasileios Megalooikonomou, Sophia Kossida
https://doi.org/10.7717/peerj.185 PubMed 24167780
June 18, 2013
Factors associated with delayed entry into HIV medical care after HIV diagnosis in a resource-limited setting: Data from a cohort study in India
Gerardo Alvarez-Uria
https://doi.org/10.7717/peerj.90 PubMed 23802091