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Nicole Nogoy

PeerJ Editor & Author

Summary

Former Executive Editor at GigaScience, with a PhD in Natural Science (Georg-August Universitat, Goettingen). I have 14 years experience in Open Science and FAIR publishing, and was the launch Managing Editor of Genome Medicine.

Bioinformatics Computer Education Data Science Databases

Editorial Board Member

PeerJ - the multidisciplinary STM open access journal

PeerJ Computer Science

Identities

@medi_cole

June 28, 2024

Analytical code sharing practices in biomedical research

Nitesh Kumar Sharma, Ram Ayyala, Dhrithi Deshpande, Yesha Patel, Viorel Munteanu, Dumitru Ciorba, Viorel Bostan, Andrada Fiscutean, Mohammad Vahed, Aditya Sarkar, Ruiwei Guo, Andrew Moore, Nicholas Darci-Maher, Nicole Nogoy, Malak Abedalthagafi, Serghei Mangul

https://doi.org/10.7717/peerj-cs.2066

Academic Editor on

February 4, 2026

Bridging AI and hematology: a novel hybrid model for accurate blood cell type classification

Osama M. Alshehri, Ahmad Shaf, Muhammad Irfan, Mohammed M. Jalal, Malik A. Altayar, Mohammed H. Abu-Alghayth, Tareg M. Belali, Tariq Ali, Humood Al Shmrany

https://doi.org/10.7717/peerj-cs.3570

February 4, 2026

A dual oscillatory particle swarm optimization for tomato disease classification

Jia Guo, Yingzhi Li, Qi Yuan, Guanqun Sun, Yi Di, Yuji Sato

https://doi.org/10.7717/peerj-cs.3566

February 4, 2026

AI-based detection and sizing of saccular intracranial aneurysms: a single-center retrospective validation study using computed tomography angiography

Lu Zeng, Xue-hua Zhang, Wen-hao Li, Bi-yao Qiao, Jia-jia Chen, Guang-xian Wang

https://doi.org/10.7717/peerj.20712

February 3, 2026

Machine learning-driven PET-CT and clinical pathology model for predicting mediastinal lymph node metastasis in non-small cell lung cancer: a retrospective cohort study

Taiyu Bi, Min Qiang, Xiaotian Duan, Yipeng Yin, Wenyu Zhang, Zhe Chen, Xinjun Zhang, Jianzun Ma, Bowei Zhang, Mingbo Tang, Wei Liu

https://doi.org/10.7717/peerj.20788

February 2, 2026

DC-TSCM: an interpretable dual-channel traditional Chinese medicine syndrome classification model via semantic-structural fusion

Jialu Tang, Song He

https://doi.org/10.7717/peerj-cs.3555

February 2, 2026

Comprehensive machine learning and experimental verification reveal the mechanism of action of autophagy-related genes FIZ1 and FBXO21 in acute kidney injury

Yunqi Bai, Lili Zhang, Bo Nie, Yixin Su, Jingwei Zhou

https://doi.org/10.7717/peerj.20707

February 2, 2026

Brain disease diagnosis using federated deep learning

Mustafa Abdul Salam, Omnia Atef, Nabil Abdel Salam, Mohammed Aldawsari

https://doi.org/10.7717/peerj-cs.3545

January 30, 2026

Genome-wide identification of SMALL AUXIN UP RNA (SAUR) gene family and its expression profiles in response to abiotic stress and auxin in tea plants (Camellia sinensis)

Yan Wang, Fan Ye, Jialing Nie, Yuanyuan Wu, Mengxin Zhou, Kun Wang, Kuanru Hu, Guofeng Liu

https://doi.org/10.7717/peerj.20681 PubMed 41635806

January 28, 2026

UBE2S and HIF1α expression patterns and stratified analysis reveal prognostic value in esophageal squamous cell carcinoma

Mingfu Ma, Mengyan Li, Yuanyuan Lv, Yahao Zhang, Xuelian Pang, Yuqing Ma

https://doi.org/10.7717/peerj.20694 PubMed 41623377

January 28, 2026

Evaluating video-based synthetic data for training lightweight models in strawberry leaf disease classification

Adnan Miski

https://doi.org/10.7717/peerj-cs.3521

January 27, 2026

Development of hybrid approach for named entity recognition in Uzbek language text

Davlatyor Mengliev, Vladimir Barakhnin, Bahodir Ibragimov, Mukhriddin Eshkulov, Oybek Allamov, Madirimov Shohrux, Otabek Khujaev, Bakhtiyar Rakhimov

https://doi.org/10.7717/peerj-cs.3489

January 27, 2026

Mapping and modelling land degradation vulnerability in a semi-arid region: a case study from Battalgazi District, Turkiye

Miraç Kılıç

https://doi.org/10.7717/peerj.20606 PubMed 41623390

January 20, 2026

Development and validation of an early prediction model for hypertriglyceridaemic severe acute pancreatitis: a retrospective study

Yuzhi Cao, Wenxiu Li, Peng Peng, Jinrong Wu, Xiao Xiao, Xiaoqiang Wan, Cheng He, Chuanming Li, Yongchao Wang, Dianliang Fang

https://doi.org/10.7717/peerj.20607 PubMed 41584837

January 19, 2026

Genome-wide association study identifies GAK and KLF12 associated with curve severity of adolescent idiopathic scoliosis

Zhicheng Dai, Zhichong Wu, Leilei Xu, Zhenhua Feng, Yong Qiu, Zezhang Zhu

https://doi.org/10.7717/peerj.20638 PubMed 41584833

January 19, 2026

A machine learning-based decision model for optimal return height in tennis

Jiacai Ma, Bingjie Chen

https://doi.org/10.7717/peerj-cs.3439

January 16, 2026

Machine learning and radiomics for predicting therapeutic efficacy in newly diagnosed sputum-negative pulmonary tuberculosis: a retrospective study

Shanshan Sun, Ye Li, Yiyan Lu, Yan Lv, Dailun Hou, Liang Li

https://doi.org/10.7717/peerj.20557 PubMed 41561821

January 15, 2026

A hierarchical multi-scale neural network framework for schistocyte detection in blood smears

Zhijie Luo, Rui Chen, Xinxin He, Haolin Chen, Ling Luo, Li Li, Yang Gu

https://doi.org/10.7717/peerj-cs.3475

January 14, 2026

Phylogenetics within Camassia (Asparagaceae): examining difficult taxonomy and unusual variation using genomic restriction-site-associated DNA sequencing data

Jenny K. Archibald, Susan R. Kephart, Patrick J. Monnahan, Kathryn E. Theiss, Theresa M. Culley

https://doi.org/10.7717/peerj.20438 PubMed 41551467

January 14, 2026

The simple multivariable model for predicting liver fibrosis in Vietnamese male adults: a combination of Bayesian model averaging and stepwise method

Nghia Nhu Nguyen, Bao The Nguyen, Huyen Thi Ngoc Le, Hoang Nhat Dang, Hao Minh Pham, Duong Dai Ngo, Duy Khanh Tran Nguyen, Tam Thai Thanh Tran, Hung Thanh Kim, Tan Ngoc Huynh Mai

https://doi.org/10.7717/peerj.20435 PubMed 41551471

January 13, 2026

A non-invasive secreted protein-based gene signature for prognostic stratification and tumor microenvironment assessment in gastric cancer

Qiuxia Liu, Haofeng Yin, Ziming Wang, Qianlong Shen, Jianguo Zhao, Xianhe Xie

https://doi.org/10.7717/peerj.20517 PubMed 41551463

January 12, 2026

GastroNet: a novel framework for detection and classification of stomach cancers

Asif Raza, Muhammad Javed Iqbal, Ali Raza, Shehzad Ashraf Chaudhry

https://doi.org/10.7717/peerj-cs.3432

January 8, 2026

Evaluating large language models’ Arabic grammar error corrections and explanations

Kousar Mohi, Imtiaz Ahmad, Sa’ed Abed