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PlantCV v2.0: Image analysis software for high-throughput plant phenotyping

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RT @peschel: PlantCV v2.0: Image Analysis Software for High-Throughput Plant Phenotyping https://t.co/OGmqOVRe0l #PaperPerDay https://t.co/…
RT @peschel: PlantCV v2.0: Image Analysis Software for High-Throughput Plant Phenotyping https://t.co/OGmqOVRe0l #PaperPerDay https://t.co/…
RT @peschel: PlantCV v2.0: Image Analysis Software for High-Throughput Plant Phenotyping https://t.co/OGmqOVRe0l #PaperPerDay https://t.co/…
RT @peschel: PlantCV v2.0: Image Analysis Software for High-Throughput Plant Phenotyping https://t.co/OGmqOVRe0l #PaperPerDay https://t.co/…
RT @peschel: PlantCV v2.0: Image Analysis Software for High-Throughput Plant Phenotyping https://t.co/OGmqOVRe0l #PaperPerDay https://t.co/…
RT @peschel: PlantCV v2.0: Image Analysis Software for High-Throughput Plant Phenotyping https://t.co/OGmqOVRe0l #PaperPerDay https://t.co/…
RT @peschel: PlantCV v2.0: Image Analysis Software for High-Throughput Plant Phenotyping https://t.co/OGmqOVRe0l #PaperPerDay https://t.co/…
RT @peschel: PlantCV v2.0: Image Analysis Software for High-Throughput Plant Phenotyping https://t.co/OGmqOVRe0l #PaperPerDay https://t.co/…
RT @peschel: PlantCV v2.0: Image Analysis Software for High-Throughput Plant Phenotyping https://t.co/OGmqOVRe0l #PaperPerDay https://t.co/…
20 days ago
RT @peschel: PlantCV v2.0: Image Analysis Software for High-Throughput Plant Phenotyping https://t.co/OGmqOVRe0l #PaperPerDay https://t.co/…
RT @peschel: PlantCV v2.0: Image Analysis Software for High-Throughput Plant Phenotyping https://t.co/OGmqOVRe0l #PaperPerDay https://t.co/…
RT @peschel: PlantCV v2.0: Image Analysis Software for High-Throughput Plant Phenotyping https://t.co/OGmqOVRe0l #PaperPerDay https://t.co/…
PlantCV v2.0: Image Analysis Software for High-Throughput Plant Phenotyping https://t.co/OGmqOVRe0l #PaperPerDay https://t.co/gBThRPmk8P
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
65 days ago
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
76 days ago
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
76 days ago
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
77 days ago
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
77 days ago
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
77 days ago
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
77 days ago
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
77 days ago
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
RT @plantcv: The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
77 days ago
The PlantCV v2.0 preprint is online! Feedback welcome. https://t.co/z3arG9GxnR https://t.co/155ONsf684
77 days ago
PlantCV v2.0: Image analysis software for high-throughput plant phenotyping https://t.co/gZdiu38o9V
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Additional Information

Competing Interests

Malia A Gehan, Noah Fahlgren, Arash Abbasi, Jeffrey C Berry, Steven T Callen, Leonardo Chavez, Max J Feldman, Kerrigan B Gilbert, Steen Hoyer, Andy Lin, César Lizárraga, Michael Miller and Monica Tessman contributed to the research described while working at the Donald Danforth Plant Science Center, a 501(c)(3) nonprofit research institute. Suxing Liu and Argelia Lorence contributed to the research described while working at the University of Arkansas. John G Hodge and Andrew N Doust contributed to the research described while working at the University of Oklahoma. Eric Platon contributed to the research described while working as a founder and employee of Cosmos X. Tony Sax contributed to the research described while a full-time student at the Missouri University of Science and Technology.

Author Contributions

Malia A Gehan conceived and designed the experiments, performed the experiments, analyzed the data, contributed reagents/materials/analysis tools, wrote the paper, prepared figures and/or tables, reviewed drafts of the paper.

Noah Fahlgren conceived and designed the experiments, performed the experiments, analyzed the data, contributed reagents/materials/analysis tools, wrote the paper, prepared figures and/or tables, reviewed drafts of the paper.

Arash Abbasi contributed reagents/materials/analysis tools, wrote the paper, reviewed drafts of the paper.

Jeffrey C Berry contributed reagents/materials/analysis tools, reviewed drafts of the paper.

Steven T Callen analyzed the data, contributed reagents/materials/analysis tools, wrote the paper, reviewed drafts of the paper.

Leonardo Chavez contributed reagents/materials/analysis tools, reviewed drafts of the paper.

Andrew N Doust contributed reagents/materials/analysis tools, wrote the paper, reviewed drafts of the paper.

Max J Feldman conceived and designed the experiments, performed the experiments, analyzed the data, contributed reagents/materials/analysis tools, wrote the paper, prepared figures and/or tables, reviewed drafts of the paper.

Kerrigan B Gilbert prepared figures and/or tables, reviewed drafts of the paper.

John G Hodge contributed reagents/materials/analysis tools, wrote the paper, reviewed drafts of the paper.

J Steen Hoyer performed the experiments, contributed reagents/materials/analysis tools, wrote the paper, reviewed drafts of the paper.

Andy Lin contributed reagents/materials/analysis tools, reviewed drafts of the paper.

Suxing Liu conceived and designed the experiments, contributed reagents/materials/analysis tools, wrote the paper, reviewed drafts of the paper.

César Lizárraga contributed reagents/materials/analysis tools, reviewed drafts of the paper.

Argelia Lorence conceived and designed the experiments, contributed reagents/materials/analysis tools, wrote the paper, reviewed drafts of the paper.

Michael Miller contributed reagents/materials/analysis tools, reviewed drafts of the paper.

Eric Platon contributed reagents/materials/analysis tools, reviewed drafts of the paper.

Monica Tessman contributed reagents/materials/analysis tools, reviewed drafts of the paper.

Tony Sax contributed reagents/materials/analysis tools, reviewed drafts of the paper.

Data Deposition

The following information was supplied regarding data availability:

PlantCV is available on GitHub at https://github.com/danforthcenter/plantcv. PlantCV v2.0 is archived on Zenodo at https://doi.org/10.5281/zenodo.854674. Scripts used for image and statistical analysis are available on GitHub at https://github.com/danforthcenter/plantcv-v2-paper.

Funding

This work was supported by the Donald Danforth Plant Science Center, the US National Science Foundation (IIA-1430427, IIA-1430428, IIA-1355406, IOS-1202682, MCB-1330562, and DBI-1156581), the US Department of Energy (DE-AR0000594, DE-SC0014395), and the US Department of Agriculture (MOW-2012-01361 and 2016-67009-25639). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.


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