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DNA-barcoding of forensically important blow flies (Diptera: Calliphoridae) in the Caribbean Region

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191 days ago
PJpreprint: DNA-barcoding of forensically important blow flies (Diptera: Calliphoridae) in the Caribbean Region https://t.co/Js3Bai2RVF
191 days ago
DNA-barcoding of forensically important blow flies (Diptera: Calliphoridae) in the Caribbean Region https://t.co/Oe281NxWwY
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Supplemental Information

Phylogenetic relationship within Calliphoridae based on a Bayesian analysis of nucleotide data from COI

Numbers indicate posterior probability support values. Specimen voucher codes referred to in Table 1 are shown following species names. For specimens from Lesser Antilles (LA), the three capital letters before the voucher code refers to the name of the islands abbreviated a follows: SBA, St. Barthelemy; SAB, Saba; BAR, Barbuda; NEV, Nevis; KIT, St. Kitts; MTQ, Martinique; ANT, Antigua; GUA, Guadeloupe; MON, Montserrat; EUS, St. Eustatius; SMA, St. Martin, SLU, St. Lucia; BBD Barbados.

DOI: 10.7287/peerj.preprints.3014v1/supp-1

Phylogenetic relationship within Calliphoridae based on a Bayesian analysis of nucleotide data from ITS

Numbers indicate posterior probability support values. Specimen voucher codes referred to in Table 1 are shown following species names. For specimens from Lesser Antilles (LA), the three capital letters before the voucher code refers to the name of the islands abbreviated a follows: SBA, St. Barthelemy; SAB, Saba; BAR, Barbuda; NEV, Nevis; KIT, St. Kitts; MTQ, Martinique; ANT, Antigua; GUA, Guadeloupe; MON, Montserrat; EUS, St. Eustatius; SMA, St. Martin, SLU, St. Lucia; BBD Barbados.

DOI: 10.7287/peerj.preprints.3014v1/supp-2

Phylogenetic relationship within Calliphoridae based on based on partitioned Bayesian analysis of the combined gene (COI and ITS2) data set

Numbers indicate posterior probability support values. Specimen voucher codes referred to in Table 1 are shown following species names. For specimens from Lesser Antilles (LA), the three capital letters before the voucher code refers to the name of the islands abbreviated a follows: SBA, St. Barthelemy; SAB, Saba; BAR, Barbuda; NEV, Nevis; KIT, St. Kitts; MTQ, Martinique; ANT, Antigua; GUA, Guadeloupe; MON, Montserrat; EUS, St. Eustatius; SMA, St. Martin, SLU, St. Lucia; BBD Barbados.

DOI: 10.7287/peerj.preprints.3014v1/supp-3

Additional Information

Competing Interests

The authors declare that they have no competing interests.

Author Contributions

Sohath Z Yusseff-Vanegas conceived and designed the experiments, performed the experiments, analyzed the data, wrote the paper, prepared figures and/or tables, reviewed drafts of the paper.

Ingi Agnarsson conceived and designed the experiments, contributed reagents/materials/analysis tools, wrote the paper, reviewed drafts of the paper.

Field Study Permissions

The following information was supplied relating to field study approvals (i.e., approving body and any reference numbers):

All specimens were collected under appropriate permits: USA, Florida, Everglades, United States Department of the Interior National Park Service EVER-2013-SCI-0028; Puerto Rico, DRNA: 2011-IC-035 (O-VS-PVS15-SJ-00474-08042011); Jamaica, NEPA, reference number #18/27; USA, USDI National Park Service,EVER-2013-SCI-0028; Costa Rica, SINAC, pasaporte científico no. 05933, resolución no. 019-2013-SINAC; Cuba, Departamento de Recursos Naturales, PE 2012/05, 2012003 and 2012001; Dominican Republic, Ministerio de Medio Ambiente y Recursos Naturales, no 0577, Mexico, SEMARNAT scientific collector permit FAUT-0175 issued to Dr. Oscar Federico Francke Ballve, Oficio no. SGPA/DGVS/10102/13; Colombia, Authoridad Nacional de Licencias Ambientales, 18.497.666 issued to Alexander Gómez Mejía; Saba, The Executive Council of the Public Entity Saba, no 112/2013; Martinique, Ministère de L’Écologie, du Développement Durable, et de L‘Énergie; Nevis, Nevis Historical & Conservation Society, no F001; Barbados, Ministry of Environment and Drainage, no 8434/56/1 Vol. II.

DNA Deposition

The following information was supplied regarding the deposition of DNA sequences:

The GenBank accession numbers are in Table 1.

Data Deposition

The following information was supplied regarding data availability:

The raw data has been supplied as a supplementary file.

Funding

Funding for this work comes from National Science Foundation (DEB-1314749 and DEB-1050253) to I. Agnarsson and G. Binford. Development of this project was further supported by a UVM APLE grant to Omar Neyra and Cole Rachman. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.


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