This is a key to the supplementary tables 1-9.
Gene abundances in Transcripts per Million for each gene by condition, timepoint and replicate
Primers used for RT-qPCR in this study.
Individual timepoint analysis
Contrasts LD expression against SD expression results at individual timepoints using using Wald significance tests.
DE pattern genes
Results of the likelihood ratio test testing for genes with significant interaction terms indicative of differential patterns of expression.
DE pattern contrasts
Contrasts LD expression against SD expression for genes with differential patterns of expression at individual timepoints.
DE pattern clusters
Cluster assignments of genes of the differential patterns of expression class
DE magnitude genes
Results of the Wald significance test testing for the significance of the condition in explaining the magnitude of gene expression.
DE magnitude contrasts
Contrasts LD expression against SD expression for genes with differential magnitudes but not patterns of expression at individual timepoints.