Identification of WD40 gene family in Prunus mume and its expression level under light illumination
- Published
- Accepted
- Subject Areas
- Biotechnology, Genetics, Genomics
- Keywords
- light intensity, Prunusmume, WD40, expression level
- Copyright
- © 2018 Fanfan et al.
- Licence
- This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ Preprints) and either DOI or URL of the article must be cited.
- Cite this article
- 2018. Identification of WD40 gene family in Prunus mume and its expression level under light illumination. PeerJ Preprints 6:e27106v1 https://doi.org/10.7287/peerj.preprints.27106v1
Abstract
The WD40 gene family in Prunusmume was identified by bioinformatics analysis., The evolution and function of WD40 gene family were predicted by phylogenetic analysis, chromosome localization analysis, protein sequence analysis, exon-intron structure analysis. The results showed that the WD40 gene family contained 77 members, which were divided into 61 groups, and only 18 groups had more than one member. When the plum plants were treated with different density of light illumination, the content of anthocyanin in plants was increased with the illumination enhancement, qRT-PCR analyses revealed that the expression of 27 WD40 genes showed the same expression trend. The results of this study can provide useful information for further studying the function of WD40 genes in Prunusmume.
Author Comment
This is a submission to PeerJ for review.
Supplemental Information
Relative expression
Relative expression of PmWD40 gene family in different illumination