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February 2016

Table of Contents - PeerJ Preprints

February 2, 2016 - Version: 2

ANGSD-wrapper: utilities for analyzing next generation sequencing data

Arun Durvasula, Paul J Hoffman, Tyler V Kent, Chaochih Liu, Thomas J Y Kono, Peter L Morrell, Jeffrey Ross-Ibarra

https://doi.org/10.7287/peerj.preprints.1472v2

February 27, 2016 - Version: 1

pyAffy: An efficient Python/Cython implementation of the RMA method for processing raw data from Affymetrix expression microarrays

Florian Wagner

https://doi.org/10.7287/peerj.preprints.1790v1

February 2, 2016 - Version: 1

Identifying contamination with advanced visualization and analysis practices: metagenomic approaches for eukaryotic genome assemblies

Tom O Delmont, A. Murat Eren

https://doi.org/10.7287/peerj.preprints.1695v1

February 6, 2016 - Version: 1

BMPR1A signalling is linked to tumour progression in dedifferentiated liposarcomas: lessons for rhBMP2 use in spinal surgery

Hannah L O'Neill, Amy P Cassidy, Olivia B Harris, John W Cassidy

https://doi.org/10.7287/peerj.preprints.1719v1

February 9, 2016 - Version: 2

DChIPRep, an R/Bioconductor package for differential enrichment analysis in chromatin studies

Christophe D Chabbert, Lars M Steinmetz, Bernd Klaus

https://doi.org/10.7287/peerj.preprints.1723v2

February 21, 2016 - Version: 1

Epithelial, metabolic and innate immunity transcriptomic signatures differentiating the rumen from other sheep and mammalian gastrointestinal tract tissues

Ruidong Xiang, Victor Hutton Oddy, Alan L. Archibald, Phillip E. Vercoe, Brian P. Dalrymple

https://doi.org/10.7287/peerj.preprints.1766v1

February 12, 2016 - Version: 1

Epithelial, metabolic and innate immunity transcriptomic signatures differentiating the rumen from other sheep and mammalian gastrointestinal tract tissues

Ruidong Xiang, Victor Hutton Oddy, Alan L. Archibald, Phillip E. Vercoe, Brian P. Dalrymple

https://doi.org/10.7287/peerj.preprints.1742v1

February 16, 2016 - Version: 1

Computational inference of H3K4me3 and H3K27ac domain length

Julian Zubek, Michael L Stitzel, Duygu Ucar, Dariusz M Plewczynski

https://doi.org/10.7287/peerj.preprints.1748v1

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