A model for passive and active transmembrane transport derived from thermodynamical principles
- Published
- Accepted
- Subject Areas
- Biophysics, Mathematical Biology, Neuroscience
- Keywords
- Thermodynamics of molecular transport, Membrane excitability, Computational physiology, Computational biophysics, Computational neurosciences, Passive and active transport
- Copyright
- © 2018 Herrera-Valdez
- Licence
- This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ Preprints) and either DOI or URL of the article must be cited.
- Cite this article
- 2018. A model for passive and active transmembrane transport derived from thermodynamical principles. PeerJ Preprints 6:e1312v7 https://doi.org/10.7287/peerj.preprints.1312v7
Abstract
All transmembrane ionic fluxes, whether electrodiffusive or driven by active transport, can be thought of in terms of the energy required to move ions across the membrane. A generic formulation for the transmembrane flux of ions is derived from thermodynamical principles combining a kinetic scheme with the Butler-Volmer equation. The formulation describes active (i.e. mediated by pumps) and passive transmembrane transport (e.g. channel-mediated) mechanisms with the same functional form. The flux described by the formulation is a product of a basal rate and a difference of exponential functions that depends on the transmembrane concentrations of the ions undergoing transport, a term that controls the symmetry of the transport, and the direction in which each of the molecules is transported. Electrogenic fluxes described by the generic formulation also depend on the transmembrane potential, and can be readily converted into currents. The linear approximation around the reversal potential for the generic current turns out to be the widely used conductance-based formulation. The derivations presented here show that models of transmembrane potential can be formulated in terms of currents with a common functional form and provide theoretical explanations for the quantitative differences and the qualitative similarities between pump- and channel mediated ionic fluxes. The applicability of the generic formulations is illustrated with models of transmembrane potential that reproduce the dynamics of pacemaking in cardiocytes. The generic formulations presented here provide a common ground for the study of physiological phenomena that depend on transmembrane transport.
Author Comment
This is a preprint submission to PeerJ Preprints.