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Daniel S. Katz
PeerJ Editor & Author
1,455 Points

Contributions by role

Author 540
Preprint Author 245
Editor 670
Preprint Feedback 15
Answers 10

Contributions by subject area

Computer Education
Scientific Computing and Simulation
Software Engineering
Digital Libraries
Data Science
Bioinformatics
Data Mining and Machine Learning
Science Policy
Translational Medicine
Human-Computer Interaction
Computational Science
Databases
Distributed and Parallel Computing
Emerging Technologies
World Wide Web and Web Science
Security and Privacy
Algorithms and Analysis of Algorithms
Computational Biology
Computer Architecture
Social Computing
Operating Systems
Science and Medical Education

By Q&A topic

Digital-libraries
Software-engineering

Daniel S. Katz

PeerJ Editor & Author

Summary

Dan's interest is in the development and use of advanced cyberinfrastructure to solve challenging problems at multiple scales. His technical research interests are in applications, algorithms, fault tolerance, and programming in parallel and distributed computing, including HPC, Grid, Cloud, etc. He is also interested in policy issues, including citation and credit mechanisms and practices associated with software and data, organization and community practices for collaboration, and career paths for computing researchers.

Computational Science Distributed & Parallel Computing Science Policy Scientific Computing & Simulation

Editing Sections

Algorithms, Software and Theory

Editing Journals

PeerJ Computer Science

Past or current institution affiliations

University of Illinois
University of Illinois at Urbana-Champaign

Work details

Chief Scientist, National Center for Supercomputing Applications

University of Illinois at Urbana-Champaign
National Center for Supercomputing Applications

Identities

@danielskatz

Websites

  • Personal site
  • GitHub
  • LinkedIn
  • Google Scholar

PeerJ Contributions

  • Articles 4
  • Preprints 4
  • Edited 5
  • Feedback 1
  • Answers 1
May 5, 2022
A survey of the state of the practice for research software in the United States
Jeffrey C. Carver, Nic Weber, Karthik Ram, Sandra Gesing, Daniel S. Katz
https://doi.org/10.7717/peerj-cs.963
August 29, 2018
BioWorkbench: a high-performance framework for managing and analyzing bioinformatics experiments
Maria Luiza Mondelli, Thiago Magalhães, Guilherme Loss, Michael Wilde, Ian Foster, Marta Mattoso, Daniel Katz, Helio Barbosa, Ana Tereza R. de Vasconcelos, Kary Ocaña, Luiz M.R. Gadelha
https://doi.org/10.7717/peerj.5551 PubMed 30186700
February 12, 2018
Journal of Open Source Software (JOSS): design and first-year review
Arfon M. Smith, Kyle E. Niemeyer, Daniel S. Katz, Lorena A. Barba, George Githinji, Melissa Gymrek, Kathryn D. Huff, Christopher R. Madan, Abigail Cabunoc Mayes, Kevin M. Moerman, Pjotr Prins, Karthik Ram, Ariel Rokem, Tracy K. Teal, Roman Valls Guimera, Jacob T. Vanderplas
https://doi.org/10.7717/peerj-cs.147
September 19, 2016
Software citation principles
Arfon M. Smith, Daniel S. Katz, Kyle E. Niemeyer
https://doi.org/10.7717/peerj-cs.86
March 1, 2017 - Version: 1
Open Science strategies for NIH data management, sharing, and citation
Tim Clark, Helena Cousijn, Daniel S Katz, Martin Fenner
https://doi.org/10.7287/peerj.preprints.2836v1
December 17, 2016 - Version: 1
Strategies for biomedical software management, sharing, and citation
Daniel S Katz, Kyle E Niemeyer, Arfon M Smith
https://doi.org/10.7287/peerj.preprints.2640v1
December 10, 2016 - Version: 1
Software vs. data in the context of citation
Daniel S Katz, Kyle E Niemeyer, Arfon M Smith, William L Anderson, Carl Boettiger, Konrad Hinsen, Rob Hooft, Michael Hucka, Allen Lee, Frank Löffler, Tom Pollard, Fernando Rios
https://doi.org/10.7287/peerj.preprints.2630v1
August 22, 2016 - Version: 4
Software Citation Principles
Arfon M Smith, Daniel S Katz, Kyle E Niemeyer
https://doi.org/10.7287/peerj.preprints.2169v4

Academic Editor on

June 1, 2021
A technique for parallel query optimization using MapReduce framework and a semantic-based clustering method
Elham Azhir, Nima Jafari Navimipour, Mehdi Hosseinzadeh, Arash Sharifi, Aso Darwesh
https://doi.org/10.7717/peerj-cs.580
May 7, 2021
Distributed in-memory data management for workflow executions
Renan Souza, Vitor Silva, Alexandre A. B. Lima, Daniel de Oliveira, Patrick Valduriez, Marta Mattoso
https://doi.org/10.7717/peerj-cs.527
September 28, 2020
A survey of accepted authors in computer systems conferences
Eitan Frachtenberg, Noah Koster
https://doi.org/10.7717/peerj-cs.299
November 11, 2019
On-demand virtual research environments using microservices
Marco Capuccini, Anders Larsson, Matteo Carone, Jon Ander Novella, Noureddin Sadawi, Jianliang Gao, Salman Toor, Ola Spjuth
https://doi.org/10.7717/peerj-cs.232
July 23, 2018
Verifiability in computer-aided research: the role of digital scientific notations at the human-computer interface
Konrad Hinsen
https://doi.org/10.7717/peerj-cs.158

Provided feedback on

04 Jan 2017

Do you speak open science? Resources and tips to learn the language

While I like this preprint, I have some suggestions to expand its reach and make it more applicable: 1 - Open Science isn't just for reproducibility; it's also for credit. I thin...

1 Answer

1
Cite landing pages or repo in light of Git{Hub|Lab} Pages