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January 2023

Table of Contents - PeerJ (Biology Articles)

January 5, 2023

Serratia marcescens antibiotic resistance mechanisms of an opportunistic pathogen: a literature review

Faviola Tavares-Carreon, Karla De Anda-Mora, Idalia C. Rojas-Barrera, Angel Andrade

https://doi.org/10.7717/peerj.14399 PubMed 36627920

January 9, 2023

Dominance of Bacillus species in the wheat (Triticum aestivum L.) rhizosphere and their plant growth promoting potential under salt stress conditions

Syeda Tahseen Zahra, Mohsin Tariq, Muhammad Abdullah, Farrukh Azeem, Muhammad Arslan Ashraf

https://doi.org/10.7717/peerj.14621 PubMed 36643649

January 6, 2023

The biomarkers discovery of hyperuricemia and gout: proteomics and metabolomics

Xinghong Wu, Chongge You

https://doi.org/10.7717/peerj.14554 PubMed 36632144

January 9, 2023

Be positive: customized reference databases and new, local barcodes balance false taxonomic assignments in metabarcoding studies

Francesco Mugnai, Federica Costantini, Anne Chenuil, Michèle Leduc, José Miguel Gutiérrez Ortega, Emese Meglécz

https://doi.org/10.7717/peerj.14616 PubMed 36643652

January 26, 2023

Performance of methods for SARS-CoV-2 variant detection and abundance estimation within mixed population samples

Tunc Kayikcioglu, Jasmine Amirzadegan, Hugh Rand, Bereket Tesfaldet, Ruth E. Timme, James B. Pettengill

https://doi.org/10.7717/peerj.14596 PubMed 36721781

January 3, 2023

Epigenetic regulation of dental-derived stem cells and their application in pulp and periodontal regeneration

Yuyang Chen, Xiayi Wang, Zhuoxuan Wu, Shiyu Jia, Mian Wan

https://doi.org/10.7717/peerj.14550 PubMed 36620748

January 9, 2023

Exosomes derived from M1 macrophages inhibit the proliferation of the A549 and H1299 lung cancer cell lines via the miRNA-let-7b-5p-GNG5 axis

Jingcui Peng, Sa Li, Bin Li, WenXia Hu, Cuimin Ding

https://doi.org/10.7717/peerj.14608 PubMed 36643646

January 25, 2023

Genome-wide in silico identification of glutathione S-transferase (GST) gene family members in fig (Ficus carica L.) and expression characteristics during fruit color development

Longbo Liu, Shuxuan Zheng, Dekun Yang, Jie Zheng

https://doi.org/10.7717/peerj.14406 PubMed 36718451

January 9, 2023

Co-circulation of all the four Dengue virus serotypes during 2018–2019: first report from Eastern Uttar Pradesh, India

Sthita Pragnya Behera, Pooja Bhardwaj, Hirawati Deval, Neha Srivastava, Rajeev Singh, Brij Ranjan Misra, Awdhesh Agrawal, Asif Kavathekar, Rajni Kant

https://doi.org/10.7717/peerj.14504 PubMed 36643644

January 18, 2023

N⁶-methyladenosine (m⁶A) reader IGF2BP1 facilitates clear-cell renal cell carcinoma aerobic glycolysis

Bao Yuan, Jin Zhou

https://doi.org/10.7717/peerj.14591 PubMed 36691477

January 27, 2023

Microscopic polyangiitis plasma-derived exosomal miR-1287-5p induces endothelial inflammatory injury and neutrophil adhesion by targeting CBL

Yan Zhu, Liu Liu, Liepeng Chu, Jingjing Lan, Jingsi Wei, Wei Li, Chao Xue

https://doi.org/10.7717/peerj.14579 PubMed 36726727

January 23, 2023

Assessing the breeding phenology of a threatened frog species using eDNA and automatic acoustic monitoring

Ying Chen, Orianne Tournayre, Haolun Tian, Stephen C. Lougheed

https://doi.org/10.7717/peerj.14679 PubMed 36710869

January 12, 2023

Modeling geographic distribution of arbuscular mycorrhizal fungi from molecular evidence in soils of Argentinean Puna using a maximum entropy approach

Davide Nepote Valentin, Samuele Voyron, Florencia Soteras, Hebe Jorgelina Iriarte, Andrea Giovannini, Erica Lumini, Mónica A. Lugo

https://doi.org/10.7717/peerj.14651 PubMed 36650841

January 5, 2023

Comparing diversity patterns and processes of microbial community assembly in water column and sediment in Lake Wuchang, China

Xuemei Li, Zihao Meng, Kang Chen, Feifei Hu, Lu Liu, Tingbing Zhu, Deguo Yang

https://doi.org/10.7717/peerj.14592 PubMed 36627922

January 3, 2023

Insular holobionts: persistence and seasonal plasticity of the Balearic wall lizard (Podarcis lilfordi) gut microbiota

Laura Baldo, Giacomo Tavecchia, Andreu Rotger, José Manuel Igual, Joan Lluís Riera

https://doi.org/10.7717/peerj.14511 PubMed 36620745

January 13, 2023

Genome-wide identification and expression analysis of calmodulin-like proteins in cucumber

Yunfen Liu, Feilong Yin, Lingyan Liao, Liang Shuai

https://doi.org/10.7717/peerj.14637 PubMed 36655051

January 10, 2023

Pemafibrate prevents choroidal neovascularization in a mouse model of neovascular age-related macular degeneration

Deokho Lee, Ayaka Nakai, Yukihiro Miwa, Kazuno Negishi, Yohei Tomita, Toshihide Kurihara

https://doi.org/10.7717/peerj.14611 PubMed 36643635

January 24, 2023

RNAi-based knockdown of candidate gut receptor genes altered the susceptibility of Spodoptera frugiperda and S. litura larvae to a chimeric toxin Cry1AcF

Tushar K. Dutta, Kodhandaraman Santhoshkumar, Arudhimath Veeresh, Chandramani Waghmare, Chetna Mathur, Rohini Sreevathsa

https://doi.org/10.7717/peerj.14716 PubMed 36710863

January 23, 2023

Individuality and stability of the koala (Phascolarctos cinereus) faecal microbiota through time

Raphael Eisenhofer, Kylie L. Brice, Michaela DJ Blyton, Scott E. Bevins, Kellie Leigh, Brajesh K. Singh, Kristofer M. Helgen, Ian Hough, Christopher B. Daniels, Natasha Speight, Ben D. Moore

https://doi.org/10.7717/peerj.14598 PubMed 36710873

January 31, 2023

Bidirectional effect of vitamin D on brown adipogenesis of C3H10T1/2 fibroblast-like cells

Takako Mukai, Tatsuya Kusudo

https://doi.org/10.7717/peerj.14785 PubMed 36815991

January 11, 2023

Taxonomic review of Saguinus mystax (Spix, 1823) (Primates, Callitrichidae), and description of a new species

Gerson Paulino Lopes, Fábio Rohe, Fabrício Bertuol, Erico Polo, Ivan Junqueira Lima, João Valsecchi, Tamily Carvalho Melo Santos, Stephen D. Nash, Maria Nazareth Ferreira da Silva, Jean P. Boubli, Izeni Pires Farias, Tomas Hrbek

https://doi.org/10.7717/peerj.14526 PubMed 36647446

January 25, 2023

Extensively drug-resistant Acinetobacter baumannii: role of conjugative plasmids in transferring resistance

Qutaiba Ababneh, Sara Al Sbei, Ziad Jaradat, Sebawe Syaj, Neda’a Aldaken, Hamza Ababneh, Zeina Inaya

https://doi.org/10.7717/peerj.14709 PubMed 36718445

January 30, 2023

Exploring the mechanisms by which camel lactoferrin can kill Salmonella enterica serovar typhimurium and Shigella sonnei

Hussein A. Almehdar, Nawal Abd El-Baky, Ehab H. Mattar, Raed Albiheyri, Atif Bamagoos, Abdullah Aljaddawi, Vladimir N. Uversky, Elrashdy M. Redwan

https://doi.org/10.7717/peerj.14809 PubMed 36743956

January 26, 2023

Next-generation sequencing shows the genomic features of ovarian clear cell cancer and compares the genetic architectures of high-grade serous ovarian cancer and clear cell carcinoma in ovarian and endometrial tissues

Meifu Gan, Zaixian Tai, Yijian Yu, Chao Zhang, Juan Xu

https://doi.org/10.7717/peerj.14653 PubMed 36721777

January 13, 2023

Change and stasis of distinct sediment microbiomes across Port Everglades Inlet (PEI) and the adjacent coral reefs

Lauren E. Krausfeldt, Jose Victor Lopez, Catherine Margaret Bilodeau, Hyo Won Lee, Shelby L. Casali

https://doi.org/10.7717/peerj.14288 PubMed 36655050

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