March 2021

Table of Contents - PeerJ (Biology Articles)

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bioinformatics
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March 16, 2021
Reproducible, portable, and efficient ancient genome reconstruction with nf-core/eager
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https://doi.org/10.7717/peerj.10947 PubMed 33777521
March 30, 2021
COL1A1 is a prognostic biomarker and correlated with immune infiltrates in lung cancer
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https://doi.org/10.7717/peerj.11145 PubMed 33850663
March 2, 2021
Comparative transcriptome analyses of maize seedling root responses to salt stress
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https://doi.org/10.7717/peerj.10765 PubMed 33717668
March 30, 2021
VirION2: a short- and long-read sequencing and informatics workflow to study the genomic diversity of viruses in nature
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https://doi.org/10.7717/peerj.11088 PubMed 33850654
March 31, 2021
The classification of EEG-based winking signals: a transfer learning and random forest pipeline
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https://doi.org/10.7717/peerj.11182 PubMed 33850667
March 15, 2021
Beyond gene ontology (GO): using biocuration approach to improve the gene nomenclature and functional annotation of rice S-domain kinase subfamily
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https://doi.org/10.7717/peerj.11052 PubMed 33777532
March 31, 2021
New alignment-based sequence extraction software (ALiBaSeq) and its utility for deep level phylogenetics
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https://doi.org/10.7717/peerj.11019 PubMed 33850647
March 8, 2021
Integrated analysis of immune-related long noncoding RNAs as diagnostic biomarkers in psoriasis
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https://doi.org/10.7717/peerj.11018 PubMed 33732554
March 5, 2021
Identification of the hub genes in gastric cancer through weighted gene co-expression network analysis
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https://doi.org/10.7717/peerj.10682 PubMed 33717664
March 10, 2021
A novel predicted ADP-ribosyltransferase-like family conserved in eukaryotic evolution
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https://doi.org/10.7717/peerj.11051 PubMed 33854844
March 2, 2021
Genome-wide identification and expression analysis of ADP-ribosylation factors associated with biotic and abiotic stress in wheat (Triticum aestivum L.)
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https://doi.org/10.7717/peerj.10963 PubMed 33717696
March 2, 2021
The methylation level of TFAP2A is a potential diagnostic biomarker for retinoblastoma: an analytical validation study
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https://doi.org/10.7717/peerj.10830 PubMed 33717678
March 10, 2021
Characterization of the first vaginal Lactobacillus crispatus genomes isolated in Brazil
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https://doi.org/10.7717/peerj.11079 PubMed 33854845
March 9, 2021
Long-term storage of feces at −80 °C versus −20 °C is negligible for 16S rRNA amplicon profiling of the equine bacterial microbiome
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https://doi.org/10.7717/peerj.10837 PubMed 33854827
March 10, 2021
Genome-wide identification and expression pattern of SnRK gene family under several hormone treatments and its role in floral scent emission in Hedychium coronarium
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https://doi.org/10.7717/peerj.10883 PubMed 33854831
March 23, 2021
Immunoinformatic approach to design a multiepitope vaccine targeting non-mutational hotspot regions of structural and non-structural proteins of the SARS CoV2
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https://doi.org/10.7717/peerj.11126 PubMed 33828922
March 17, 2021
Bioinformatics analysis identified CDC20 as a potential drug target for cholangiocarcinoma
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https://doi.org/10.7717/peerj.11067 PubMed 33777535
March 4, 2021
Differential gene expression in a tripartite interaction: Drosophila, Spiroplasma and parasitic wasps
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https://doi.org/10.7717/peerj.11020 PubMed 33717711
March 3, 2021
iTRAQ-based comparative proteome analyses of different growth stages revealing the regulatory role of reactive oxygen species in the fruiting body development of Ophiocordyceps sinensis
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https://doi.org/10.7717/peerj.10940 PubMed 33717691
March 31, 2021
Bioinformatic strategies for the analysis of genomic aberrations detected by targeted NGS panels with clinical application
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https://doi.org/10.7717/peerj.10897 PubMed 33850640
March 24, 2021
LINflow: a computational pipeline that combines an alignment-free with an alignment-based method to accelerate generation of similarity matrices for prokaryotic genomes
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https://doi.org/10.7717/peerj.10906 PubMed 33828908
March 18, 2021
Identification of fibroblast activation-related genes in two acute kidney injury models
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https://doi.org/10.7717/peerj.10926 PubMed 33777519
March 9, 2021
Sucrose synthase gene family in Brassica juncea: genomic organization, evolutionary comparisons, and expression regulation
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https://doi.org/10.7717/peerj.10878 PubMed 33854830
March 16, 2021
Transcriptome profiling reveals histone deacetylase 1 gene overexpression improves flavonoid, isoflavonoid, and phenylpropanoid metabolism in Arachis hypogaea hairy roots
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https://doi.org/10.7717/peerj.10976 PubMed 33777524
March 19, 2021
Network based multifactorial modelling of miRNA-target interactions
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https://doi.org/10.7717/peerj.11121 PubMed 33777541

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I told my colleagues that PeerJ is a journal where they need to publish if they want their paper to be published quickly and with the strict peer review expected from a good journal.
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