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April 2018

Table of Contents - PeerJ (Biology Articles)

Variation in Late Jurassic tridactyl dinosaur tracks

Fig 2 - Pictures and false-color depth maps of the tracks

April 2, 2018

Variation in Late Jurassic tridactyl dinosaur tracks

Minute to medium-sized tridactyl dinosaur footprints from the tracksites of Highway A16 in the Jura Mountains represent one of the largest samples from the Late Jurassic worldwide. Researchers conducted Integrated analyses of the quality of preservation, the maximum depth, the shape variation along the trackway, and the footprint proportions

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April 25, 2018

phylopath: Easy phylogenetic path analysis in R

Wouter van der Bijl

https://doi.org/10.7717/peerj.4718 PubMed 29713568

April 23, 2018

Genome comparison implies the role of Wsm2 in membrane trafficking and protein degradation

Guorong Zhang, Zhihua Hua

https://doi.org/10.7717/peerj.4678 PubMed 29707435

April 18, 2018

Accuracy of taxonomy prediction for 16S rRNA and fungal ITS sequences

Robert C. Edgar

https://doi.org/10.7717/peerj.4652 PubMed 29682424

April 18, 2018

Flavonoid biosynthesis controls fiber color in naturally colored cotton

Hai-Feng Liu, Cheng Luo, Wu Song, Haitao Shen, Guoliang Li, Zhi-Gang He, Wen-Gang Chen, Yan-Yan Cao, Fang Huang, Shou-Wu Tang, Ping Hong, En-Feng Zhao, Jianbo Zhu, Dajun He, Shaoming Wang, Guang-Ying Huo, Hailiang Liu

https://doi.org/10.7717/peerj.4537 PubMed 29682406

April 16, 2018

TAS3 miR390-dependent loci in non-vascular land plants: towards a comprehensive reconstruction of the gene evolutionary history

Sergey Y. Morozov, Irina A. Milyutina, Tatiana N. Erokhina, Liudmila V. Ozerova, Alexey V. Troitsky, Andrey G. Solovyev

https://doi.org/10.7717/peerj.4636 PubMed 29682420

April 11, 2018

Empirical evaluation of data normalization methods for molecular classification

Huei-Chung Huang, Li-Xuan Qin

https://doi.org/10.7717/peerj.4584 PubMed 29666754

April 9, 2018

Estimating intraspecific genetic diversity from community DNA metabarcoding data

Vasco Elbrecht, Ecaterina Edith Vamos, Dirk Steinke, Florian Leese

https://doi.org/10.7717/peerj.4644 PubMed 29666773

April 9, 2018

miRNAome expression profiles in the gonads of adult Melopsittacus undulatus

Lan Jiang, Qingqing Wang, Jue Yu, Vinita Gowda, Gabriel Johnson, Jianke Yang, Xianzhao Kan, Xiaojun Yang

https://doi.org/10.7717/peerj.4615 PubMed 29666766

April 9, 2018

Phosphoproteomic insights into processes influenced by the kinase-like protein DIA1/C3orf58

Agnieszka Hareza, Magda Bakun, Bianka Świderska, Małgorzata Dudkiewicz, Alicja Koscielny, Anna Bajur, Jacek Jaworski, Michał Dadlez, Krzysztof Pawłowski

https://doi.org/10.7717/peerj.4599 PubMed 29666759

April 9, 2018

Pathways of topological rank analysis (PoTRA): a novel method to detect pathways involved in hepatocellular carcinoma

Chaoxing Li, Li Liu, Valentin Dinu

https://doi.org/10.7717/peerj.4571 PubMed 29666752

April 2, 2018

GMPR: A robust normalization method for zero-inflated count data with application to microbiome sequencing data

Li Chen, James Reeve, Lujun Zhang, Shengbing Huang, Xuefeng Wang, Jun Chen

https://doi.org/10.7717/peerj.4600 PubMed 29629248

April 2, 2018

PlasmidSeeker: identification of known plasmids from bacterial whole genome sequencing reads

Märt Roosaare, Mikk Puustusmaa, Märt Möls, Mihkel Vaher, Maido Remm