October 2017

Table of Contents - PeerJ (Biology Articles)

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Machine learning to analyze colon glands

Malignant colorectal cancer

October 3, 2017

Machine learning to analyze colon glands

Due to the large variability of biological tissue, machine learning techniques have shown superior performance over conventional image processing methods. Here, researchers present a deep neural network-based approach for segmentation and classification of glands in tissue of benign and malignant colorectal cancer.

- read article

October 31, 2017
Record breaking achievements by spiders and the scientists who study them
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https://doi.org/10.7717/peerj.3972 PubMed 29104823
October 4, 2017
Accuracy of microbial community diversity estimated by closed- and open-reference OTUs
https://doi.org/10.7717/peerj.3889 PubMed 29018622
October 13, 2017
Multigene phylogeny of the scyphozoan jellyfish family Pelagiidae reveals that the common U.S. Atlantic sea nettle comprises two distinct species (Chrysaora quinquecirrha and C. chesapeakei)
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https://doi.org/10.7717/peerj.3863 PubMed 29043109
October 3, 2017
Exceptional soft tissues preservation in a mummified frog-eating Eocene salamander
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https://doi.org/10.7717/peerj.3861 PubMed 29018606
October 24, 2017
Norwegian honey bees surviving Varroa destructor mite infestations by means of natural selection
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https://doi.org/10.7717/peerj.3956 PubMed 29085753
October 24, 2017
A massive update of non-indigenous species records in Mediterranean marinas
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https://doi.org/10.7717/peerj.3954 PubMed 29085752
October 10, 2017
Illegal use of natural resources in federal protected areas of the Brazilian Amazon
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https://doi.org/10.7717/peerj.3902 PubMed 29038758
October 3, 2017
Segmentation and classification of colon glands with deep convolutional neural networks and total variation regularization
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https://doi.org/10.7717/peerj.3874 PubMed 29018612
October 17, 2017
How to normalize metatranscriptomic count data for differential expression analysis
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https://doi.org/10.7717/peerj.3859 PubMed 29062598
October 24, 2017
Measuring language lateralisation with different language tasks: a systematic review
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https://doi.org/10.7717/peerj.3929 PubMed 29085748
October 6, 2017
Benchmark datasets for phylogenomic pipeline validation, applications for foodborne pathogen surveillance
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https://doi.org/10.7717/peerj.3893 PubMed 29372115
October 24, 2017
Statins: antimicrobial resistance breakers or makers?
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https://doi.org/10.7717/peerj.3952 PubMed 29085751
October 13, 2017
Mysterious inhibitory cell regulator investigated and found likely to be secretogranin II related
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https://doi.org/10.7717/peerj.3833 PubMed 29043108
October 5, 2017
New whaitsioids (Therapsida: Therocephalia) from the Teekloof Formation of South Africa and therocephalian diversity during the end-Guadalupian extinction
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https://doi.org/10.7717/peerj.3868 PubMed 29018609
October 12, 2017
The complete chloroplast genome sequence of strawberry (Fragaria  × ananassa Duch.) and comparison with related species of Rosaceae
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https://doi.org/10.7717/peerj.3919 PubMed 29038765
October 11, 2017
Light induced intraspecific variability in response to thermal stress in the hard coral Stylophora pistillata
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https://doi.org/10.7717/peerj.3802 PubMed 29038747
October 3, 2017
Development and validation of near-infrared spectroscopy for the prediction of forage quality parameters in Lolium multiflorum
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https://doi.org/10.7717/peerj.3867 PubMed 29018608
October 19, 2017
The neuroprotective effect of nicotine in Parkinson’s disease models is associated with inhibiting PARP-1 and caspase-3 cleavage
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https://doi.org/10.7717/peerj.3933 PubMed 29062606
October 10, 2017
Infection of army ant pupae by two new parasitoid mites (Mesostigmata: Uropodina)
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https://doi.org/10.7717/peerj.3870 PubMed 29038753
October 5, 2017
Clone wars: asexual reproduction dominates in the invasive range of Tubastraea spp. (Anthozoa: Scleractinia) in the South-Atlantic Ocean
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https://doi.org/10.7717/peerj.3873 PubMed 29018611
October 20, 2017
Effects of GnRHa treatment during vitellogenesis on the reproductive physiology of thermally challenged female Atlantic salmon (Salmo salar)
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https://doi.org/10.7717/peerj.3898 PubMed 29062601
October 20, 2017
Oxygen-limited metabolism in the methanotroph Methylomicrobium buryatense 5GB1C
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https://doi.org/10.7717/peerj.3945 PubMed 29062611
October 12, 2017
Is geography an accurate predictor of evolutionary history in the millipede family Xystodesmidae?
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https://doi.org/10.7717/peerj.3854 PubMed 29038750
October 20, 2017
The benefits of Tai Chi and brisk walking for cognitive function and fitness in older adults
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https://doi.org/10.7717/peerj.3943 PubMed 29062610
October 26, 2017
Species–specific crab predation on the hydrozoan clinging jellyfish Gonionemus sp. (Cnidaria, Hydrozoa), subsequent crab mortality, and possible ecological consequences
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https://doi.org/10.7717/peerj.3966 PubMed 29085761
Machine learning to analyze colon glands

Malignant colorectal cancer

October 3, 2017

Machine learning to analyze colon glands

Due to the large variability of biological tissue, machine learning techniques have shown superior performance over conventional image processing methods. Here, researchers present a deep neural network-based approach for segmentation and classification of glands in tissue of benign and malignant colorectal cancer.

- read article

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I told my colleagues that PeerJ is a journal where they need to publish if they want their paper to be published quickly and with the strict peer review expected from a good journal.
Sohath Vanegas,
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