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Jose Lopez
PeerJ Author & Reviewer
475 Points

Contributions by role

Author 405
Preprint Author 35
Reviewer 35

Contributions by subject area

Environmental Sciences
Genomics
Marine Biology
Microbiology
Environmental Impacts
Molecular Biology
Biological Oceanography
Evolutionary Studies
Zoology
Biodiversity
Bioinformatics

Jose V Lopez

PeerJ Author & Reviewer

Summary

Dr. Jose (Joe) Lopez is a Professor at the Nova Southeastern University Halmos College of Arts and Sciences. He earned a Master’s degree at Florida State University, and his doctorate at George Mason University studying the evolution of mitochondrial DNA and its transpositions (Numt) in feline nuclear genomes. Dr Lopez then applied his molecular evolutionary training characterizing the Orbicella (formerly Montastraea) annularis coral sibling species complex at STRI in Panama, and sponge genetics at Harbor Branch Oceanographic Institute. Since 2007, Dr Lopez’s current research at the NSU Center of Excellence in Coral Reef Ecosystems Research, involves diverse projects on marine invertebrate-microbial symbiosis, genomics and metagenomics of marine habitats, gene expression of marine organisms, marine microbiology, and systematics/phylogenetics for placing marine sponges on a global Tree of Life (www.PorToL.org). He was co-founder of the “Global Invertebrate Genomics Alliance” (http://gigacos.org), which applies genome sequencing of non-model invertebrate species, and Dr. Lopez is also involved with the consortium of sponge biologists characterizing symbionts as part of the global Earth Microbiome Project (http://earthmicrobiome.org). Dr. Lopez was also a team member of DEEPEND (Deep Pelagic Nekton Dynamics of the Gulf of Mexico –http://www.deependconsortium.org), which focused on oil effects in deep waters of the Gulf of Mexico. Recent research focuses on high throughput analyses of the genomes, metatranscriptomes and metagenomes of cyanobacterial communities and diverse marine invertebrate (sponges, corals, mollusk) symbioses through consortia with the Earth BioGenome (https://www.earthbiogenome.org/) and Aquatic Symbiosis Genome Projects (https://www.sanger.ac.uk/collaboration/aquatic-symbiosis-genomics-project/).

Biodiversity Evolutionary Studies Genomics Microbiology Molecular Biology

Past or current institution affiliations

Nova Southeastern University

Work details

Professor

Nova Southeastern University
Department of Biological Sciences, Halmos College of Natural Sciences and Oceanography

The Global Invertebrate Genomics Alliance (GIGA)
GIGA supports the training and coordination of various aquatic invertebrate genomics projects.

Websites

  • Google Scholar
  • Lopez Laboratory

PeerJ Contributions

  • Articles 3
  • Preprints 1
  • Reviewed 1
January 13, 2023
Change and stasis of distinct sediment microbiomes across Port Everglades Inlet (PEI) and the adjacent coral reefs
Lauren E. Krausfeldt, Jose Victor Lopez, Catherine Margaret Bilodeau, Hyo Won Lee, Shelby L. Casali
https://doi.org/10.7717/peerj.14288 PubMed 36655050
May 8, 2018
Fine grained compositional analysis of Port Everglades Inlet microbiome using high throughput DNA sequencing
Lauren O’Connell, Song Gao, Donald McCorquodale, Jay Fleisher, Jose V. Lopez
https://doi.org/10.7717/peerj.4671 PubMed 29761039
January 8, 2018
Is there a link between aging and microbiome diversity in exceptional mammalian longevity?
Graham M. Hughes, John Leech, Sébastien J. Puechmaille, Jose V. Lopez, Emma C. Teeling
https://doi.org/10.7717/peerj.4174 PubMed 29333342
October 25, 2017 - Version: 1
Fine grained compositional analysis of Port Everglades Inlet microbiome using high throughput DNA sequencing
Lauren O'Connell, Song Gao, Donald McCorquodale, Jay Fleisher, Jose V Lopez
https://doi.org/10.7287/peerj.preprints.3369v1

Signed reviews submitted for articles published in PeerJ Note that some articles may not have the review itself made public unless authors have made them open as well.

October 11, 2016
Greater than X kb: a quantitative assessment of preservation conditions on genomic DNA quality, and a proposed standard for genome-quality DNA
Daniel G. Mulcahy, Kenneth S. Macdonald, Seán G. Brady, Christopher Meyer, Katharine B. Barker, Jonathan Coddington
https://doi.org/10.7717/peerj.2528 PubMed 27761327