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Sushma Naithani
PeerJ Editor, Author & Reviewer
770 Points

Contributions by role

Author 135
Reviewer 35
Editor 600

Contributions by subject area

Bioinformatics
Genomics
Molecular Biology
Plant Science
Agricultural Science
Biotechnology
Genetics

Sushma Naithani

PeerJ Editor, Author & Reviewer

Summary

Sushma Naithani is an Associate Professor Senior Research in the Department of Botany and Plant Pathology at Oregon State University, USA. The current focus of her research is on understanding information flow in living systems and how evolution shapes this flow using systems-level pathway modeling supported by high-quality biocuration, gene-orthology-based predictions, and analysis of omics data. She serves as a senior curator for the Plant Reactome knowledgebase. Sushma has authored 31 peer-reviewed refereed research articles in high-impact journals, including Nature, Nature Biotech, PNAS, etc. One of her research papers has been selected by the 'Faculty of 1000 Biology'. In addition, she has authored six book chapters and one Open Textbook (S. Naithani (2021): History and Science of Cultivated Plants published by Oregon State University Open Educational Resources, EBOOK ISBN: 978-1-955101-08-0, available at https://open.oregonstate.education/cultivatedplants). She is also an Associate Editor for Frontiers in Plant Science-Plant Biotechnology and served as the Editor-in-chief of the Current Plant Biology (2017-2023).

Agricultural Science Biochemistry Bioinformatics Biotechnology Cell Biology Computational Biology Data Mining & Machine Learning Developmental Biology Genetics Genomics Molecular Biology Plant Science

Editorial Board Member

PeerJ - the Journal of Life & Environmental Sciences

Past or current institution affiliations

Oregon State University

Work details

Associate Professor Senior Research

Oregon State University
July 2020
Botany and Plant Pathology
Area of Expertise: Plant pathway biocuration, and gene-gene network modeling Systems biology, Genomics, Cell-cell signaling, Self-incompatibility, Mitochondria biogenesis, Photosynthesis, and Chloroplast biology.

Assistant Professor Senior Research

Oregon State University
October 2008 - June 2020
Botany and Plant Pathology
Area of Expertise: Plant pathway biocuration, and gene-gene network modeling, Systems biology, Genomics, Cell-cell signaling, Self-incompatibility, Mitochondria biogenesis, Photosynthesis, and Chloroplast biology

Identities

@naithani_s

Websites

  • PubMed Search
  • Google Scholar

PeerJ Contributions

  • Articles 1
  • Edited 4
  • Reviewed 1
March 15, 2021
Beyond gene ontology (GO): using biocuration approach to improve the gene nomenclature and functional annotation of rice S-domain kinase subfamily
Sushma Naithani, Daemon Dikeman, Priyanka Garg, Noor Al-Bader, Pankaj Jaiswal
https://doi.org/10.7717/peerj.11052 PubMed 33777532

Academic Editor on

October 16, 2024
Comparative transcriptome analysis to identify the important mRNA and lncRNA associated with salinity tolerance in alfalfa
Gaimei Yang, Zhengyan Li, Mengru Rong, Rugang Yu, Qiting Zhang, Guoliang Wang, Zhiming Xu, Xueling Du, Xian Xu
https://doi.org/10.7717/peerj.18236 PubMed 39430557
October 13, 2023
Comprehensive study of serine/arginine-rich (SR) gene family in rice: characterization, evolution and expression analysis
Rui Gao, Yingying Lu, Nan Wu, Hui Liu, Xiaoli Jin
https://doi.org/10.7717/peerj.16193 PubMed 37849832
September 20, 2023
Genome-wide identification of putative dihydroflavonol 4-reductase (DFR) gene family in eight Solanaceae species and expression analysis in Solanum lycopersicum
Wenjing Li, Yiming Zhang, Hualiang Liu, Qiuping Wang, Xue Feng, Congyan Wang, Yanxiang Sun, Xinye Zhang, Shu Zhu
https://doi.org/10.7717/peerj.16124
December 5, 2022
Identification, classification, and expression profile analysis of heat shock transcription factor gene family in Salvia miltiorrhiza
Rui Liu, Peijin Zou, Zhu-Yun Yan, Xin Chen
https://doi.org/10.7717/peerj.14464 PubMed 36523473

Signed reviews submitted for articles published in PeerJ Note that some articles may not have the review itself made public unless authors have made them open as well.

August 31, 2020
Gametophytic self-incompatibility in Andean capuli (Prunus serotina subsp. capuli): allelic diversity at the S-RNase locus influences normal pollen-tube formation during fertilization
Milton Gordillo-Romero, Lisa Correa-Baus, Verónica Baquero-Méndez, María de Lourdes Torres, Carlos Vintimilla, Jose Tobar, Andrés F. Torres
https://doi.org/10.7717/peerj.9597 PubMed 32944417