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Catherine Putonti
PeerJ Author & Reviewer
675 Points

Contributions by role

Author 640
Reviewer 35

Contributions by subject area

Bioinformatics
Computational Biology
Microbiology
Virology
Genomics
Evolutionary Studies

Catherine Putonti

PeerJ Author & Reviewer

Summary

Catherine is a computational biologist focused in the area of microbial evolution, blending traditional bench molecular biology techniques and applied computer science. As such, the line between biology and computer science is often blurred.

Bioinformatics Computational Biology Evolutionary Studies Genomics Molecular Biology Virology

Past or current institution affiliations

Loyola University of Chicago

Work details

Professor

Loyola University of Chicago
August 2007
Faculty in Biology & Microbiology and Immunology, Bioinformatics Program Director

Websites

  • Putonti Lab
  • PubMed Search

PeerJ Contributions

  • Articles 5
  • Reviewed 1
June 7, 2022
Genomic insights into Lactobacillus gasseri and Lactobacillus paragasseri
Adriana Ene, Natalie Stegman, Alan Wolfe, Catherine Putonti
https://doi.org/10.7717/peerj.13479 PubMed 35694384
August 6, 2021
Rephine.r: a pipeline for correcting gene calls and clusters to improve phage pangenomes and phylogenies
Jason W. Shapiro, Catherine Putonti
https://doi.org/10.7717/peerj.11950 PubMed 34434663
August 31, 2020
Mimicking prophage induction in the body: induction in the lab with pH gradients
Taylor Miller-Ensminger, Andrea Garretto, Nicole Stark, Catherine Putonti
https://doi.org/10.7717/peerj.9718 PubMed 32944418
April 10, 2019
virMine: automated detection of viral sequences from complex metagenomic samples
Andrea Garretto, Thomas Hatzopoulos, Catherine Putonti
https://doi.org/10.7717/peerj.6695 PubMed 30993039
May 2, 2017
The use of informativity in the development of robust viromics-based examinations
Siobhan C. Watkins, Catherine Putonti
https://doi.org/10.7717/peerj.3281 PubMed 28480148

Signed reviews submitted for articles published in PeerJ Note that some articles may not have the review itself made public unless authors have made them open as well.

June 1, 2016
Assessing Illumina technology for the high-throughput sequencing of bacteriophage genomes
Branko Rihtman, Sean Meaden, Martha R.J. Clokie, Britt Koskella, Andrew D. Millard
https://doi.org/10.7717/peerj.2055 PubMed 27280068