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Rodrigo Nunes-da-Fonseca
PeerJ Editor, Author & Reviewer
3,570 Points

Contributions by role

Author 335
Reviewer 35
Editor 3,200

Contributions by subject area

Conservation Biology
Genetics
Plant Science
Natural Resource Management
Aquaculture, Fisheries and Fish Science
Developmental Biology
Marine Biology
Toxicology
Zoology
Virology
Hematology
Immunology
Infectious Diseases
COVID-19
Bioinformatics
Computational Biology
Genomics
Ecotoxicology
Molecular Biology
Forestry
Population Biology
Agricultural Science
Biodiversity
Entomology
Parasitology
Taxonomy
Statistics
Biotechnology
Cell Biology
Microbiology
Biochemistry
Neuroscience
Neurology
Ecology
Dermatology
Gynecology and Obstetrics
Women's Health
Veterinary Medicine
Cardiology

Rodrigo Nunes-da-Fonseca

PeerJ Editor, Author & Reviewer

Summary

Associate Professor at the Center for Ecology and Socio-Environmental Development of Macaé, (NUPEM), Federal University of Rio de Janeiro (UFRJ-Macaé). Affiliate Member of the Brazilian Academy of Sciences (2017-2021). Scientist of Our State at FAPERJ (2019-nowadays), PhD (2008) and Postdoctoral studies (2009) in Functional Genomics and Evolutionary Developmental Biology (Evo-Devo) at the University of Cologne, Germany.

Published more than 85 articles in specialized journals with more than 3500 citations (Google Scholar-Fator H = 24). He serves as a reviewer for several international journals (NAR, Cell Reports, Dev. Gen Evol, Dev. Biol, FEBS J, Plos One, Gene, among others) particularly in the evolutionary genetics of arthropod development.

Biodiversity Bioinformatics Computational Biology Developmental Biology Genetics Genomics Molecular Biology

Editorial Board Member

PeerJ - the Journal of Life & Environmental Sciences
PeerJ Open Advances in Zoology

Past or current institution affiliations

Universidade Federal do Rio de Janeiro

Work details

Associate Professor

Universidade Federal do Rio de Janeiro
October 2009 - January 2019
NUPEM-UFRJ-Macaé

Websites

  • Google Scholar
  • ResearchGate
  • Personal Website

PeerJ Contributions

  • Articles 4
  • Edited 25
  • Reviewed 1
July 25, 2024
Identification of pre-flexion fish larvae from the western South Atlantic using DNA barcoding and morphological characters
Allan Pierre Bonetti Pozzobon, Jonathan Stuart Ready, Fabio Di Dario, Rodrigo Nunes-da-Fonseca
https://doi.org/10.7717/peerj.17791 PubMed 39071121
December 15, 2022
The long-term dynamics of serum antibodies against SARS-CoV-2
Graziele Fonseca de Sousa, Thuany da Silva Nogueira, Lana Soares de Sales, Fernanda Ferreira Maissner, Odara Araújo de Oliveira, Hellade Lopes Rangel, Daniele das Graças dos Santos, Rodrigo Nunes-da-Fonseca, Jackson de Souza-Menezes, Jose Luciano Nepomuceno-Silva, Flávia Borges Mury, Raquel de Souza Gestinari, Amilcar Tanuri, Orlando da Costa Ferreira Jr, Cintia Monteiro-de-Barros
https://doi.org/10.7717/peerj.14547 PubMed 36540807
April 14, 2021
Brazilian silverside, Atherinella brasiliensis (Quoy & Gaimard,1825) embryos as a test-species for marine fish ecotoxicological tests
Natália Martins Feitosa, Emiliano Nicolas Calderon, Rhennã Nascimento da Silva, Sônia Lopes Rezende de Melo, Jackson Souza-Menezes, Rodrigo Nunes-da-Fonseca, Márcia Vieira Reynier
https://doi.org/10.7717/peerj.11214 PubMed 33954044
November 9, 2020
The genetic diversity and population structure of two endemic Amazonian quillwort (Isoetes L.) species
Mirella Pupo Santos, João V.S. Rabelo Araujo, Arthur V. Sant’anna Lopes, Julio Cesar Fiorio Vettorazzi, Marcela Santana Bastos Boechat, Fernanda AbreuSantana Arêdes, Naiara Viana Campos, Emiliano Nicolas Calderon, Fernando M. Gomes Santos, Tais Nogueira Fernandes, Rodrigo Nunes da Fonseca, Messias Gonzaga Pereira, Guilherme Oliveira, Daniel Basilio Zandonadi, RodrigoLemes Martins, Francisco de Assis Esteves
https://doi.org/10.7717/peerj.10274 PubMed 33240624

Academic Editor on

May 23, 2025
Regulation of plant gene expression by tsRNAs in response to abiotic stress
Chunmei Li, Jing Zhu, Han Jin, Haotian Feng, Haimin Zhuang, Zijun Du, Guolin Zhu, Haiyang He, Fuyang Ye, Zhaohui Mo, Qingtao Hu, Zhenbang Chen, Kai Liu, Xiaorong Wan
https://doi.org/10.7717/peerj.19487 PubMed 40421365
May 23, 2025
Improving the cultivated rice Sakha104 (Oryza sativa L.) using gene pools of some relative wild species
Walid H. Elgamal, Mostafa M. Elshenawy, Samah M. Abdelkhalek, Dayun Tao, Jiawu Zhou, Jing Li, Medhat Rehan
https://doi.org/10.7717/peerj.19453 PubMed 40421368
May 13, 2025
Multiplex polymerase chain reaction (PCR) with Nanopore sequencing for sequence-based detection of four tilapia pathogens
Jérôme Delamare-Deboutteville, Watcharachai Meemetta, Khaettareeya Pimsannil, Han Ming Gan, Laura Khor, Mohan Chadag, Ha Thanh Dong, Saengchan Senapin
https://doi.org/10.7717/peerj.19425 PubMed 40395619
April 16, 2025
Circular RNAs in endometriosis analyzed through RNA sequencing and bioinformatics for expression profile
Yan Yue, Jing Qian, Dandan Gui, Bin Lu
https://doi.org/10.7717/peerj.19298 PubMed 40256743
February 26, 2025
Development and validation of a prognostic nomogram for predicting poor outcomes following intravenous rt-PA in patients with acute ischemic stroke
Fengjiao Zhang, Dan Zhao, Jing Zhang
https://doi.org/10.7717/peerj.18937 PubMed 40028217
January 31, 2025
Integrated analysis of ATAC-seq and RNA-seq reveals ADSCP2 regulates oxidative phosphorylation pathway in hypertrophic scar fibroblasts
Qian Li, Zhe Quan, Ling Chen, Yiliang Yin, Xin Chen, Jingyun Li
https://doi.org/10.7717/peerj.18902 PubMed 39902331
January 28, 2025
Clinical considerations on antimicrobial resistance potential of complex microbiological samples
Norbert Solymosi, Adrienn Gréta Tóth, Sára Ágnes Nagy, István Csabai, Csongor Feczkó, Tamás Reibling, Tibor Németh
https://doi.org/10.7717/peerj.18802 PubMed 39897495
January 16, 2025
Three new species of the family Idyanthidae (Copepoda, Harpacticoida) from sublittoral zones around the Korean Peninsula
Jong Guk Kim, Kyuhee Cho, Jimin Lee
https://doi.org/10.7717/peerj.18767 PubMed 39830962
December 2, 2024
Comparative genomics analysis of the MYB gene family in barley: preliminary insights into evolution and biological function in Blue Qingke
Hongyan Li, Youhua Yao, Xin Li, Yongmei Cui, Likun An, Baojun Ding, Xiaohua Yao, Kunlun Wu
https://doi.org/10.7717/peerj.18443 PubMed 39640562
October 28, 2024
Genome-wide identification and expression analysis of the OSC gene family in Platycodon grandiflorus
Xiaoqin Wang, Dong Yan, Ling Chen
https://doi.org/10.7717/peerj.18322 PubMed 39677956
October 25, 2024
The regulation role of calcium channels in mammalian sperm function: a narrative review with a focus on humans and mice
Yebin Yang, Liu Yang, Xiaoqun Han, Kuaiying Wu, Guangquan Mei, Baojian Wu, Yimin Cheng
https://doi.org/10.7717/peerj.18429 PubMed 39469589
October 14, 2024
UV-B irradiation promotes anthocyanin biosynthesis in the leaves of Lycium ruthenicum Murray
Shengrong Chen, Yunzhang Xu, Weimin Zhao, Guomin Shi, Shuai Wang, Tao He
https://doi.org/10.7717/peerj.18199 PubMed 39421417
January 15, 2024
Antimalarial target vulnerability of the putative Plasmodium falciparum methionine synthase
Nirut Leela, Parichat Prommana, Sumalee Kamchonwongpaisan, Tana Taechalertpaisarn, Philip J. Shaw
https://doi.org/10.7717/peerj.16595 PubMed 38239295
October 10, 2023
Persisting roadblocks in arthropod monitoring using non-destructive metabarcoding from collection media of passive traps
Lucas Sire, Paul Schmidt Yáñez, Annie Bézier, Béatrice Courtial, Susan Mbedi, Sarah Sparmann, Laurent Larrieu, Rodolphe Rougerie, Christophe Bouget, Michael T. Monaghan, Elisabeth A. Herniou, Carlos Lopez-Vaamonde
https://doi.org/10.7717/peerj.16022 PubMed 37842065
March 11, 2022
Evolution analysis of FRIZZY PANICLE (FZP) orthologs explored the mutations in DNA coding sequences in the grass family (Poaceae)
Jia Li, Litian Zhang, Rania G. Elbaiomy, Lilan Chen, Zhenrong Wang, Jie Jiao, Jiliang Zhu, Wanhai Zhou, Bo Chen, Salma A. Soaud, Manzar Abbas, Na Lin, Ahmed H. El-Sappah
https://doi.org/10.7717/peerj.12880 PubMed 35295554
October 12, 2020
Genomic signatures of globally enhanced gene duplicate accumulation in the megadiverse higher Diptera fueling intralocus sexual conflict resolution
Riyue Bao, Markus Friedrich
https://doi.org/10.7717/peerj.10012 PubMed 33083121
October 5, 2020
Elevation of MPF and MAPK gene expression, GSH content and mitochondrial distribution quality induced by melatonin promotes porcine oocyte maturation and development in vitro
Zimo Zhao, Ling Yang, Dan Zhang, Zi Zheng, Ning Li, Qianjun Li, Maosheng Cui
https://doi.org/10.7717/peerj.9913 PubMed 33083108
July 21, 2020
RdRp mutations are associated with SARS-CoV-2 genome evolution
Doğa Eskier, Gökhan Karakülah, Aslı Suner, Yavuz Oktay
https://doi.org/10.7717/peerj.9587 PubMed 32742818
February 4, 2020
A novel transcript of MEF2D promotes myoblast differentiation and its variations associated with growth traits in chicken
Hongjia Ouyang, Jiao Yu, Xiaolan Chen, Zhijun Wang, Qinghua Nie
https://doi.org/10.7717/peerj.8351 PubMed 32117604
January 22, 2020
The effects of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) on the transcriptome of aryl hydrocarbon receptor (AhR) knock-down porcine granulosa cells
Monika Ruszkowska, Agnieszka Sadowska, Anna Nynca, Karina Orlowska, Sylwia Swigonska, Tomasz Molcan, Lukasz Paukszto, Jan P. Jastrzebski, Renata E. Ciereszko
https://doi.org/10.7717/peerj.8371 PubMed 32002328
December 2, 2019
Global transcriptome analysis of different stages of preimplantation embryo development in river buffalo
Chun-Ying Pang, Ming-Zhou Bai, Chi Zhang, Junhui Chen, Xing-Rong Lu, Ting-Xian Deng, Xiao-Ya Ma, An-Qin Duan, Sha-sha Liang, Yun-Qi Huang, Zhihui Xiu, Xian-Wei Liang
https://doi.org/10.7717/peerj.8185 PubMed 31824777
November 26, 2019
Identification of novel genes associated with litter size of indigenous sheep population in Xinjiang, China using specific-locus amplified fragment sequencing technology
Haiyu Ma, Chao Fang, Lingling Liu, Qiong Wang, Jueken Aniwashi, Yiming Sulaiman, Kezierkailedi Abudilaheman, Wujun Liu
https://doi.org/10.7717/peerj.8079 PubMed 31788357
August 2, 2019
Reconstruction of insect hormone pathways in an aquatic firefly, Sclerotia aquatilis (Coleoptera: Lampyridae), using RNA-seq
Pornchanan Chanchay, Wanwipa Vongsangnak, Anchana Thancharoen, Ajaraporn Sriboonlert
https://doi.org/10.7717/peerj.7428 PubMed 31396456
May 28, 2019
Genetic assessment of three Fagaceae species in forest restoration trials
Patcharawadee Thongkumkoon, Siriwadee Chomdej, Jatupol Kampuansai, Waranee Pradit, Pimubon Waikham, Stephen Elliott, Sutthathorn Chairuangsri, Dia Panitnard Shannon, Prasit Wangpakapattanawong, Aizhong Liu
https://doi.org/10.7717/peerj.6958 PubMed 31179177
May 1, 2019
Development of an in vitro diagnostic method to determine the genotypic sex of Xenopus laevis
Amin Eimanifar, John Aufderheide, Suzanne Z. Schneider, Henry Krueger, Sean Gallagher
https://doi.org/10.7717/peerj.6886 PubMed 31106075

Signed reviews submitted for articles published in PeerJ Note that some articles may not have the review itself made public unless authors have made them open as well.

May 30, 2017
Modeling the cis-regulatory modules of genes expressed in developmental stages of Drosophila melanogaster
Yosvany López, Alexis Vandenbon, Akinao Nose, Kenta Nakai
https://doi.org/10.7717/peerj.3389 PubMed 28584716