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November 2020

Table of Contents - PeerJ (Medicine Articles)

November 6, 2020

Deep learning prediction of likelihood of ICU admission and mortality in COVID-19 patients using clinical variables

Xiaoran Li, Peilin Ge, Jocelyn Zhu, Haifang Li, James Graham, Adam Singer, Paul S. Richman, Tim Q. Duong

https://doi.org/10.7717/peerj.10337 PubMed 33194455

November 26, 2020

The m6A reader protein YTHDC2 is a potential biomarker and associated with immune infiltration in head and neck squamous cell carcinoma

Yang Li, Ji-Na Zheng, En-Hao Wang, Chan-Juan Gong, Keng-Fu Lan, XiaoJun Ding

https://doi.org/10.7717/peerj.10385 PubMed 33304653

November 5, 2020

Deep-learning convolutional neural networks with transfer learning accurately classify COVID-19 lung infection on portable chest radiographs

Shreeja Kikkisetti, Jocelyn Zhu, Beiyi Shen, Haifang Li, Tim Q. Duong

https://doi.org/10.7717/peerj.10309 PubMed 33194447

November 23, 2020

Identifying MMP14 and COL12A1 as a potential combination of prognostic biomarkers in pancreatic ductal adenocarcinoma using integrated bioinformatics analysis

Jingyi Ding, Yanxi Liu, Yu Lai

https://doi.org/10.7717/peerj.10419 PubMed 33282565

November 18, 2020

Stem cell imaging through convolutional neural networks: current issues and future directions in artificial intelligence technology

Ramanaesh Rao Ramakrishna, Zariyantey Abd Hamid, Wan Mimi Diyana Wan Zaki, Aqilah Baseri Huddin, Ramya Mathialagan

https://doi.org/10.7717/peerj.10346 PubMed 33240655

November 24, 2020

miR-224, miR-147b and miR-31 associated with lymph node metastasis and prognosis for lung adenocarcinoma by regulating PRPF4B, WDR82 or NR3C2

Yan Wang, Shengtao Shang, Kun Yu, Hongbin Sun, Wenduan Ma, Wei Zhao

https://doi.org/10.7717/peerj.9704 PubMed 33282547

November 24, 2020

Classification of ovarian cancer associated with BRCA1 mutations, immune checkpoints, and tumor microenvironment based on immunogenomic profiling

Yousheng Wei, Tingyu Ou, Yan Lu, Guangteng Wu, Ying Long, Xinbin Pan, Desheng Yao

https://doi.org/10.7717/peerj.10414 PubMed 33282564

November 27, 2020

Identification and prognostic value of DLGAP5 in endometrial cancer

Ruoyi Zheng, Zhengzheng Shi, Wenzhi Li, Jianqin Yu, Yuli Wang, Qing Zhou

https://doi.org/10.7717/peerj.10433 PubMed 33312770

November 3, 2020

Increased expression of POLR3G predicts poor prognosis in transitional cell carcinoma

Xianhui Liu, Weiyu Zhang, Huanrui Wang, Chin-Hui Lai, Kexin Xu, Hao Hu

https://doi.org/10.7717/peerj.10281 PubMed 33194434

November 17, 2020

Different analysis strategies of 16S rRNA gene data from rodent studies generate contrasting views of gut bacterial communities associated with diet, health and obesity

Jose F. Garcia-Mazcorro, Jorge R. Kawas, Cuauhtemoc Licona Cassani, Susanne Mertens-Talcott, Giuliana Noratto

https://doi.org/10.7717/peerj.10372 PubMed 33240672

November 20, 2020

Loss of HOXB3 correlates with the development of hormone receptor negative breast cancer

Lizhe Zhu, Shibo Yu, Siyuan Jiang, Guanqun Ge, Yu Yan, Yuhui Zhou, Ligang Niu, Jianjun He, Yu Ren, Bin Wang

https://doi.org/10.7717/peerj.10421 PubMed 33240685

November 13, 2020

Identification of L-asparaginases from Streptomyces strains with competitive activity and immunogenic profiles: a bioinformatic approach

Iván González-Torres, Ernesto Perez-Rueda, Zahaed Evangelista-Martínez, Andrés Zárate-Romero, Angélica Moreno-Enríquez, Alejandro Huerta-Saquero

https://doi.org/10.7717/peerj.10276 PubMed 33240625

November 3, 2020

Differentially expressed serum proteins in children with or without asthma as determined using isobaric tags for relative and absolute quantitation proteomics

Ming Li, Mingzhu Wu, Ying Qin, Huaqing Liu, Chengcheng Tu, Bing Shen, Xiaohong Xu, Hongbo Chen

https://doi.org/10.7717/peerj.9971 PubMed 33194371

November 17, 2020

Analysis of genes and underlying mechanisms involved in foam cells formation and atherosclerosis development

Kai Zhang, Xianyu Qin, Xianwu Zhou, Jianrong Zhou, Pengju Wen, Shaoxian Chen, Min Wu, Yueheng Wu, Jian Zhuang

https://doi.org/10.7717/peerj.10336 PubMed 33240650

November 20, 2020

Identification of hub genes associated with the pathogenesis of diffuse large B-cell lymphoma subtype one characterized by host response via integrated bioinformatic analyses

Lingna Zhou, Liya Ding, Yuqi Gong, Jing Zhao, Gong Xin, Ren Zhou, Wei Zhang

https://doi.org/10.7717/peerj.10269 PubMed 33240622

November 26, 2020

A signature of tumor DNA repair genes associated with the prognosis of surgically-resected lung adenocarcinoma

Xiongtao Yang, Guohui Wang, Runchuan Gu, Xiaohong Xu, Guangying Zhu

https://doi.org/10.7717/peerj.10418 PubMed 33304656

November 19, 2020

Comprehensive analysis and identification of key genes and signaling pathways in the occurrence and metastasis of cutaneous melanoma

Hanying Dai, Lihuang Guo, Mingyue Lin, Zhenbo Cheng, Jiancheng Li, Jinxia Tang, Xisha Huan, Yue Huang, Keqian Xu

https://doi.org/10.7717/peerj.10265 PubMed 33240619

November 3, 2020

In silico structural homology modeling and characterization of multiple N-terminal domains of selected bacterial Tcps

Mohammed Alaidarous

https://doi.org/10.7717/peerj.10143 PubMed 33194392

November 4, 2020

Identification of the miRNA-mRNA regulatory pathways and a miR-21-5p based nomogram model in clear cell renal cell carcinoma

Yiqiao Zhao, Zijia Tao, Xiaonan Chen

https://doi.org/10.7717/peerj.10292 PubMed 33194441

November 23, 2020

Comprehensive genomic analysis of microenvironment phenotypes in ovarian cancer

Jingshu Wang, Tingting Zhang, Lina Yang, Gong Yang

https://doi.org/10.7717/peerj.10255 PubMed 33282553

November 20, 2020

Genomic characterization and phylogenetic analysis of Salmonella enterica serovar Javiana

Lauren K. Hudson, Lisha Constantine-Renna, Linda Thomas, Christina Moore, Xiaorong Qian, Katie Garman, John R. Dunn, Thomas G. Denes

https://doi.org/10.7717/peerj.10256 PubMed 33240617

November 27, 2020

The mRNA landscape profiling reveals potential biomarkers associated with acute kidney injury AKI after kidney transplantation

Hui Bi, Min Zhang, Jialin Wang, Gang Long

https://doi.org/10.7717/peerj.10441 PubMed 33312771

November 4, 2020

Prognostic model of invasive ductal carcinoma of the breast based on differentially expressed glycolysis-related genes

Xiaoping Li, Qihe Yu, Jishang Chen, Hui Huang, Zhuangsheng Liu, Chengxing Wang, Yaoming He, Xin Zhang, Weiwen Li, Chao Li, Jinglin Zhao, Wansheng Long

https://doi.org/10.7717/peerj.10249 PubMed 33194424

November 13, 2020

Temporal expression profiles of lncRNA and mRNA in human embryonic stem cell-derived motor neurons during differentiation

Xue-Jiao Sun, Ming-Xing Li, Chen-Zi Gong, Jing Chen, Mohammad Nasb, Sayed Zulfiqar Ali Shah, Muhammad Rehan, Ya-Jie Li, Hong Chen

https://doi.org/10.7717/peerj.10075 PubMed 33240592

November 11, 2020

Gene signature for prognosis in comparison of pancreatic cancer patients with diabetes and non-diabetes

Mingjun Yang, Boni Song, Juxiang Liu, Zhitong Bing, Yonggang Wang, Linmiao Yu

https://doi.org/10.7717/peerj.10297 PubMed 33240632

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