General - Table of Contents

Table of Contents - PeerJ (General Articles)

BALSA: integrated secondary analysis for whole-genome and whole-exome sequencing

Image: BALSA performs the whole secondary analysis in memory

June 3, 2014

BALSA: integrated secondary analysis for whole-genome and whole-exome sequencing

This peer-reviewed study reports on an integrated solution, called BALSA, for the secondary analysis of next generation sequencing data. It exploits the computational power of a Graphics Processing Unit (GPU) and an intricate memory management to give a fast and accurate analysis -

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June 19, 2014

scikit-image: image processing in Python

Stéfan van der Walt, Johannes L. Schönberger, Juan Nunez-Iglesias, François Boulogne, Joshua D. Warner, Neil Yager, Emmanuelle Gouillart, Tony Yu

https://doi.org/10.7717/peerj.453 PubMed 25024921

June 19, 2014

A third-generation dispersion and third-generation hydrogen bonding corrected PM6 method: PM6-D3H+

Jimmy C. Kromann, Anders S. Christensen, Casper Steinmann, Martin Korth, Jan H. Jensen

https://doi.org/10.7717/peerj.449 PubMed 25024918

June 17, 2014

Prediction uncertainty assessment of a systems biology model requires a sample of the full probability distribution of its parameters

Simon van Mourik, Cajo ter Braak, Hans Stigter, Jaap Molenaar