Biology & Life sciences - Table of Contents

Mario Modesto-Mata, Arthur Thiebaut, Kristin L. Krueger, A. Murat Maga, Jessica L. Joganic, Timothy M. Ryan, Joan T. Richtsmeier, James M. Cheverud, Leslea J. Hlusko

https://doi.org/10.7717/peerj.20172 PubMed 41142304

October 17, 2025

Prediction of sporulating Firmicutes from uncultured gut microbiota using SpoMAG, an ensemble learning tool

Douglas Terra Machado, Otávio José Bernardes Brustolini, Ellen dos Santos Corrêa, Ana Tereza Ribeiro Vasconcelos

https://doi.org/10.7717/peerj.20232 PubMed 41122237

October 16, 2025

LncRNACNVIntegrateR: a novel framework for correlating long non-coding RNAs with copy number variation abnormalities and disease progression

Neetu Tyagi, Shikha Roy, Dinesh Gupta

https://doi.org/10.7717/peerj.20131 PubMed 41116792

October 15, 2025

Effect of circadian rhythm disruption on benign prostatic hyperplasia in rats

Xiaoxue Huang, Xiaohu Tang, Yuanzhao Xu, Zhiyan Liu, Guangheng Luo

https://doi.org/10.7717/peerj.20173 PubMed 41112764

October 14, 2025

Unraveling the role of regulatory cell death in sepsis: an integrated analysis of bulk and single-cell sequencing data

Susu Cao, Wenyan Xiao, Sinong Pan, Siying Liu, Tianfeng Hua, Min Yang

https://doi.org/10.7717/peerj.20167 PubMed 41112767

October 14, 2025

Identification of diabetes related phenotype and diagnostic biomarkers in coronary artery disease

Gulandanmu Aihemaiti, Abulikemu Abula, Junyi Luo, Qian Zhao, Ning Song, Fen Liu, Niyaziaili Adili, Yining Yang, Xiaomei Li

https://doi.org/10.7717/peerj.20117 PubMed 41112776

October 13, 2025

Evidence of positive selection and a novel phylogeny among five subspecies of song sparrow (Melospiza melodia) in Alaska

Caitlyn C. Oliver Brown, Keiler A. Collier, David J. X. Tan, Kendall Mills, Fern Spaulding, Travis C. Glenn, Christin Pruett, Kevin Winker

https://doi.org/10.7717/peerj.19986 PubMed 41112773

October 10, 2025

Development and validation of the AUDEXCEL algorithm as a diagnostic tool for occupational noise-related hearing disorder

Sheng Qian Yew, Pothanantha Raja Pathmanathan

https://doi.org/10.7717/peerj.20149 PubMed 41089257

October 10, 2025

Characterizing programmed cell death features in osteoarthritis through integrative multiomics and machine learning analysis

Qinchao Sun, Ye Zhong, Gaoxiang Huang, Yongpei Lin

https://doi.org/10.7717/peerj.20104 PubMed 41089260

October 10, 2025

ShinyDegSEM: an interactive application for pathway perturbation analysis in gene expression studies via structural equation modeling

Zhehan Jiang, Jihong Zhang, Yuanfang Liu, Jinying Ouyang, Linlin Sun, Hao Guo

https://doi.org/10.7717/peerj.20033 PubMed 41089259

October 9, 2025

Exploring phytochemicals as potential pharmacological inhibitors for NS1 protein of Kyasanur forest disease virus using virtual screening, molecular docking, and molecular simulation approach

Sharanappa Achappa, Nayef Abdulaziz Aldabaan, Ibrahim Ahmed Shaikh, Mater H. Mahnashi, Shivalingsarj V. Desai, Mufarreh Asmari, Mohammed Alasmary, Uday M. Muddapur, Basheerahmed Abdulaziz Mannasaheb, Aejaz Abdullatif Khan

https://doi.org/10.7717/peerj.19954 PubMed 41084624

October 7, 2025

Transcriptome reveals differential expression of flavor and color in closely related strains of tomato (Solanum lycopersicum)

Chunmei Guo, Xiuyuan Liu, Yingfeng Ding, Zhaoyilan He, Songmei Shi, Yumei Ding, Hui Shen, Zhengan Yang

https://doi.org/10.7717/peerj.20113 PubMed 41081095

October 6, 2025

Soil storage temperature and air-drying did not significantly change bacterial taxa in the short-term

Mingming Du, Peipei Xue, Budiman Minasny

https://doi.org/10.7717/peerj.20162 PubMed 41081088

October 6, 2025

Bioinformatic analysis and experimental validation of hub autophagy-related genes as novel biomarkers for type 2 diabetes mellitus and Alzheimer’s disease

Rui Zhang, Ruowei Wang, Shuna Zhai, Chunhong Shen, Yu An, Quanri Liu