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September 2024

Table of Contents - PeerJ (Biology Articles)

September 25, 2024

HPV-driven heterogeneity in cervical cancer: study on the role of epithelial cells and myofibroblasts in the tumor progression based on single-cell RNA sequencing analysis

Yunyun Zhang, Yu Zhang, Chenke Pan, Wenqian Wang, Yao Yu

https://doi.org/10.7717/peerj.18158 PubMed 39346086

September 11, 2024

Integration of full-length Iso-Seq, Illumina RNA-Seq, and flavor testing reveals potential differences in ripened fruits between two Passiflora edulis cultivars

Yao Teng, Ye Wang, Sunjian Zhang, Xiaoying Zhang, Jiayu Li, Fengchan Wu, Caixia Chen, Xiuqin Long, Anding Li

https://doi.org/10.7717/peerj.17983 PubMed 39282122

September 10, 2024

Serum PCSK9 is a novel serological biomarker for the diagnosis and prognosis of pancreatic cancer

Ying Xu, Yongfeng Xu, Yang Yang, Zhiwei Zhang, Qunli Xiong, Qing Zhu

https://doi.org/10.7717/peerj.18018 PubMed 39282119

September 2, 2024

A genetic investigation in five Chinese families with keratoconus

Qinghong Lin, Xuejun Wang, Xiaoliao Peng, Tian Han, Ling Sun, Xiaoyu Zhang, Xingtao Zhou

https://doi.org/10.7717/peerj.18037 PubMed 39238827

September 30, 2024

Mosquitoes on a chip—environmental DNA-based detection of invasive mosquito species using high-throughput real-time PCR

Claudia Wittwer, Chinhda Sharif, Isabelle Schöck, Sven Klimpel

https://doi.org/10.7717/peerj.17782 PubMed 39364359

September 26, 2024

Deciphering regulatory patterns in a mouse model of hyperoxia-induced acute lung injury

Yundi Chen, Jinwen Liu, Han Qin, Song Qin, Xinyang Huang, Chunyan Wei, Xiaolin Hu

https://doi.org/10.7717/peerj.18069 PubMed 39346085

September 26, 2024

Optimizing total RNA extraction method for human and mice samples

Yumei Zeng, Xiaoxue Tang, Jinwen Chen, Xi Kang, Dazhang Bai

https://doi.org/10.7717/peerj.18072 PubMed 39346072

September 26, 2024

Construction and validation of co-expression vector for rice alpha tubulin and microtubule associated protein respectively fused with fluorescent proteins

Chenshan Xu, Xiaoli Zhu, Aihong Xu, Jian Song, Shuxia Liang

https://doi.org/10.7717/peerj.18118 PubMed 39346063

September 26, 2024

Central Angiotensin II type 1 receptor deficiency alleviates renal fibrosis by reducing sympathetic nerve discharge in nephrotoxic folic acid–induced chronic kidney disease

Qijun Wan, Zhichen Yang, Lingzhi Li, Liling Wu

https://doi.org/10.7717/peerj.18166 PubMed 39346076

September 26, 2024

Effect of AOX1 and GAP transcriptional terminators on transcript levels of both the heterologous and the GAPDH genes and the extracellular Y_p/x in GAP promoter-based Komagataella phaffii strains

José M. Viader-Salvadó, Nancy Pentón-Piña, Yanelis Robainas-del-Pino, José A. Fuentes-Garibay, Martha Guerrero-Olazarán

https://doi.org/10.7717/peerj.18181

September 25, 2024

Using transcriptome sequencing (RNA-Seq) to screen genes involved in β-glucan biosynthesis and accumulation during oat seed development

Bing jie Qi, Ming xue Ji, Zhu qing He

https://doi.org/10.7717/peerj.17804 PubMed 39346057

September 25, 2024

Identification of non-model mammal species using the MinION DNA sequencer from Oxford Nanopore

Sara Velasquez-Restrepo, Mariana Corrales Orozco, Nicolás D. Franco-Sierra, Juan M. Martínez-Cerón, Juan F. Díaz-Nieto

https://doi.org/10.7717/peerj.17887 PubMed 39346050

September 25, 2024

Genome-wide identification, expression pattern and interacting protein analysis of INDETERMINATE DOMAIN (IDD) gene family in Phalaenopsis equestris

Ting Zhang, Xin Yu, Da Liu, Deyan Zhu, Qingping Yi

https://doi.org/10.7717/peerj.18073 PubMed 39346067

September 23, 2024

Implementing high-throughput insect barcoding in microbiome studies: impact of non-destructive DNA extraction on microbiome reconstruction

Veronika Andriienko, Mateusz Buczek, Rudolf Meier, Amrita Srivathsan, Piotr Łukasik, Michał R. Kolasa

https://doi.org/10.7717/peerj.18025 PubMed 39329134

September 20, 2024

Diagnostic performance of serum metabolites biomarker associated with colorectal adenoma: a systematic review

Maryam Fatimah Abu Bakar, Siok Fong Chin, Suzana Makpol, Jen Kit Tan, Azmawati Mohammed Nawi

https://doi.org/10.7717/peerj.18043 PubMed 39314843

September 20, 2024

Expression of microRNA-155 in thalassemic erythropoiesis

Tipparat Penglong, Nuttanan Pholngam, Nasra Tehyoh, Natta Tansila, Hansuk Buncherd, Supinya Thanapongpichat, Kanitta Srinoun

https://doi.org/10.7717/peerj.18054 PubMed 39314840

September 20, 2024

Development and validation of a mitotic catastrophe-related genes prognostic model for breast cancer

Shuai Wang, Haoyi Zi, Mengxuan Li, Jing Kong, Cong Fan, Yujie Bai, Jianing Sun, Ting Wang

https://doi.org/10.7717/peerj.18075 PubMed 39314848

September 20, 2024

The role of transcriptional and epigenetic modifications in astrogliogenesis

Shuangping Ma, Lei Wang, Junhe Zhang, Lujing Geng, Junzheng Yang

https://doi.org/10.7717/peerj.18151 PubMed 39314847

September 19, 2024

Population structure and selective signature of Kirghiz sheep by Illumina Ovine SNP50 BeadChip

Ruizhi Yang, Zhipeng Han, Wen Zhou, Xuejiao Li, Xuechen Zhang, Lijun Zhu, Jieru Wang, Xiaopeng Li, Cheng-long Zhang, Yahui Han, Lianrui Li, Shudong Liu

https://doi.org/10.7717/peerj.17980 PubMed 39308831

September 19, 2024

The role of heat shock proteins in HIV-1 pathogenesis: a systematic review investigating HSPs-HIV-1 correlations and interactions

Chyntia Tresna Nastiti, Noer Halimatus Syakdiyah, R.M. Firzha Hawari, Youdiil Ophinni, Ni Luh Ayu Megasari

https://doi.org/10.7717/peerj.18002 PubMed 39308823

September 18, 2024

ANXA2 promotes osteogenic differentiation and inhibits cellular senescence of periodontal ligament cells (PDLCs) in high glucose conditions

Yanlin Huang, Jiaye Wang, Chunhui Jiang, Minghe Zheng, Mingfang Han, Qian Fang, Yizhao Liu, Ru Li, Liangjun Zhong, Zehui Li

https://doi.org/10.7717/peerj.18064 PubMed 39308808

September 18, 2024

Proteomic profiling of oleamide-mediated polarization in a primary human monocyte-derived tumor-associated macrophages (TAMs) model: a functional analysis

Prapakorn Wisitpongpun, Watunyoo Buakaew, Sutatip Pongcharoen, Napaporn Apiratmateekul, Pachuen Potup, Krai Daowtak, Sucheewin Krobthong, Yodying Yingchutrakul, Paul J. Brindley, Kanchana Usuwanthim

https://doi.org/10.7717/peerj.18090 PubMed 39308806

September 16, 2024

MME and PTPRC: key renal biomarkers in lupus nephritis

Min Wen, Marady Hun, Mingyi Zhao, Qingnan He

https://doi.org/10.7717/peerj.18070 PubMed 39301055

September 13, 2024

Phytochemical profiling and antioxidant activity assessment of Bellevalia pseudolongipes via liquid chromatography-high-resolution mass spectrometry

İdris Yolbaş

https://doi.org/10.7717/peerj.18046 PubMed 39285926

September 10, 2024

Machine learning algorithm-based biomarker exploration and validation of mitochondria-related diagnostic genes in osteoarthritis

Hongbo Wang, Zongye Zhang, Xingbo Cheng, Zhenxing Hou, Yubo Wang, Zhendong Liu, Yanzheng Gao

https://doi.org/10.7717/peerj.17963 PubMed 39282111

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