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December 2021

Table of Contents - PeerJ (Biology Articles)

December 15, 2021

Genome-wide identification, evolution, and expression analysis of the NPR1-like gene family in pears

Yarui Wei, Shuliang Zhao, Na Liu, Yuxing Zhang

https://doi.org/10.7717/peerj.12617 PubMed 35003927

December 22, 2021

Identification of HMMR as a prognostic biomarker for patients with lung adenocarcinoma via integrated bioinformatics analysis

Zhaodong Li, Hongtian Fei, Siyu Lei, Fengtong Hao, Lijie Yang, Wanze Li, Laney Zhang, Rui Fei

https://doi.org/10.7717/peerj.12624 PubMed 35036134

December 22, 2021

Ferric citrate is a safe and digestible source of iron in broilers and piglets

Klaus Männer, Hannah Lester, Eliana Henriquez-Rodriguez

https://doi.org/10.7717/peerj.12636 PubMed 35036138

December 24, 2021

Integrated analysis and the identification of a circRNA-miRNA-mRNA network in the progression of abdominal aortic aneurysm

Ke Si, Da Lu, Jianbo Tian

https://doi.org/10.7717/peerj.12682 PubMed 35036156

December 14, 2021

Comprehensive analysis of ceRNA network of ERCC4 in colorectal cancer

Huixin Hu, Songyi Liu, Aining Chu, Jing Chen, Chengzhong Xing, Jingjing Jing

https://doi.org/10.7717/peerj.12647 PubMed 34993023

December 6, 2021

The mycorrhizal fungi of Cymbidium promote the growth of Dendrobiumofficinale by increasing environmental stress tolerance

Yulong Li, Zhihua Kang, Xia Zhang, Ping Sun, Xiaohui Jiang, Zhengmin Han

https://doi.org/10.7717/peerj.12555 PubMed 34963822

December 2, 2021

CNV-P: a machine-learning framework for predicting high confident copy number variations

Taifu Wang, Jinghua Sun, Xiuqing Zhang, Wen-Jing Wang, Qing Zhou

https://doi.org/10.7717/peerj.12564 PubMed 34917425

December 9, 2021

Description and ontogeny of a 40-million-year-old parasitic isopodan crustacean: Parvucymoides dvorakorum gen. et sp. nov.

Serita Van der Wal, Mario Schädel, Boris Ekrt, Joachim T. Haug

https://doi.org/10.7717/peerj.12317 PubMed 34966568

December 24, 2021

Linking individual and population patterns of rocky-shore mussels

Romina Vanessa Barbosa, Cédric Bacher, Fred Jean, Yoann Thomas

https://doi.org/10.7717/peerj.12550 PubMed 35036122

December 1, 2021

Composition, richness and nestedness of gallery forest bird assemblages in an Amazonian savanna landscape: lessons for conservation

Joandro Pandilha, José Júlio de Toledo, Luis Cláudio Fernandes Barbosa, William Douglas Carvalho, Jackson Cleiton de Sousa, José Maria Cardoso da Silva

https://doi.org/10.7717/peerj.12529 PubMed 34917422

December 22, 2021

Transcriptome analysis of transgenic apple fruit overexpressing microRNA172 reveals candidate transcription factors regulating apple fruit development at early stages

Zhe Zhou, Yanmin Zhu, Hengtao Zhang, Ruiping Zhang, Qiming Gao, Tiyu Ding, Huan Wang, Zhenli Yan, Jia-Long Yao

https://doi.org/10.7717/peerj.12675 PubMed 35036153

December 22, 2021

Electroencephalogram-derived pain index for evaluating pain during labor

Liang Sun, Hong Zhang, Qiaoyu Han, Yi Feng

https://doi.org/10.7717/peerj.12714 PubMed 35036175

December 9, 2021

Overexpression of fucosyltransferase 8 reverses the inhibitory effect of high-dose dexamethasone on osteogenic response of MC3T3-E1 preosteoblasts

Zhiming Wu, Tianye Lin, Pan Kang, Zhikun Zhuang, Haibin Wang, Wei He, Qiushi Wei, Ziqi Li

https://doi.org/10.7717/peerj.12380 PubMed 34966572

December 9, 2021

Frequent, quantitative bone planar scintigraphy for determination of bone anabolism in growing mice

Ariane Zaloszyc, Claus Peter Schmitt, Amira Sayeh, Laetitia Higel, Catherine-Isabelle Gros, Fabien Bornert, Gaëlle Aubertin-Kirch, Jean-Philippe Dillenseger, Christian Goetz, André Constantinesco, Michel Fischbach, Seiamak Bahram, Philippe Choquet

https://doi.org/10.7717/peerj.12355 PubMed 34966570

December 8, 2021

Dinophiliformia early neurogenesis suggests the evolution of conservative neural structures across the Annelida phylogenetic tree

Elizaveta Fofanova, Tatiana D. Mayorova, Elena E. Voronezhskaya

https://doi.org/10.7717/peerj.12386 PubMed 34966573

December 17, 2021

Characterizing the Type 6 Secretion System (T6SS) and its role in the virulence of avian pathogenic Escherichia coli strain APECO18

Aline L. de Oliveira, Nicolle L. Barbieri, Darby M. Newman, Meaghan M. Young, Lisa K. Nolan, Catherine M. Logue

https://doi.org/10.7717/peerj.12631 PubMed 35003930

December 3, 2021

Detecting genes associated with antimicrobial resistance and pathogen virulence in three New Zealand rivers

Meredith Davis, Anne C. Midwinter, Richard Cosgrove, Russell G. Death

https://doi.org/10.7717/peerj.12440 PubMed 34950535

December 22, 2021

A taxonomic outline of the Poecilimon affinis complex (Orthoptera) using the geometric morphometric approach

Maciej Kociński, Beata Grzywacz, Georgi Hristov, Dragan Chobanov

https://doi.org/10.7717/peerj.12668 PubMed 35036150

December 14, 2021

Genomic profiling and expression analysis of the diacylglycerol kinase gene family in heterologous hexaploid wheat

Xiaowei Jia, Xuyang Si, Yangyang Jia, Hongyan Zhang, Shijun Tian, Wenjing Li, Ke Zhang, Yanyun Pan

https://doi.org/10.7717/peerj.12480 PubMed 34993014

December 7, 2021

The determination of thiocyanate in the blood plasma and holding water of Amphiprion clarkii after exposure to cyanide

J. Alexander Bonanno, Nancy E. Breen, Michael F. Tlusty, Lawrence Andrade, Andrew L. Rhyne

https://doi.org/10.7717/peerj.12409 PubMed 34963821

December 23, 2021

Integrated transcriptomic and proteomic analysis of Tritipyrum provides insights into the molecular basis of salt tolerance

Rui Yang, Zhifen Yang, Ze Peng, Fang He, Luxi Shi, Yabing Dong, Mingjian Ren, Qingqin Zhang, Guangdong Geng, Suqin Zhang

https://doi.org/10.7717/peerj.12683 PubMed 35036157

December 10, 2021

Transcriptome atlas of Phalaenopsis equestris

Anna V. Klepikova, Artem S. Kasianov, Margarita A. Ezhova, Aleksey A. Penin, Maria D. Logacheva

https://doi.org/10.7717/peerj.12600 PubMed 34966594

December 1, 2021

Functions of 1,25-dihydroxy vitamin D3, vitamin D3 receptor and interleukin-22 involved in pathogenesis of gout arthritis through altering metabolic pattern and inflammatory responses

Yuqi Chen, Huiya Ma, Youwei Du, Jianjian Dong, Chenkai Jin, Lihui Tan, Rong Wei

https://doi.org/10.7717/peerj.12585 PubMed 34917427

December 20, 2021

Understanding the transmission dynamics of Escherichia coli O157:H7 super-shedding infections in feedlot cattle

Elizabeth M. Antaki-Zukoski, Xunde Li, Bruce Hoar, John M. Adaska, Barbara A. Byrne, Edward R. Atwill

https://doi.org/10.7717/peerj.12524 PubMed 35036119

December 22, 2021

Small herbivores and abiotic heterogeneity promote trait variation of a saltmarsh plant in local communities

Qingqing Chen, Christian Smit, Ido Pen, Han Olff

https://doi.org/10.7717/peerj.12633 PubMed 35036137