May 2021

Table of Contents - PeerJ (Biology Articles)

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Biology
bioinformatics
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May 6, 2021
BACPHLIP: predicting bacteriophage lifestyle from conserved protein domains
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https://doi.org/10.7717/peerj.11396 PubMed 33996289
May 3, 2021
Prediction of DNA binding proteins using local features and long-term dependencies with primary sequences based on deep learning
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https://doi.org/10.7717/peerj.11262 PubMed 33986992
May 3, 2021
Genetic diversity and population structure analysis in a large collection of white clover (Trifolium repens L.) germplasm worldwide
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https://doi.org/10.7717/peerj.11325 PubMed 33987011
May 19, 2021
miRcorrNet: machine learning-based integration of miRNA and mRNA expression profiles, combined with feature grouping and ranking
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https://doi.org/10.7717/peerj.11458 PubMed 34055490
May 11, 2021
GBP2 as a potential prognostic biomarker in pancreatic adenocarcinoma
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https://doi.org/10.7717/peerj.11423 PubMed 34026364
May 19, 2021
K-mer-based machine learning method to classify LTR-retrotransposons in plant genomes
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https://doi.org/10.7717/peerj.11456 PubMed 34055489
May 27, 2021
Identification of potential gene signatures associated with osteosarcoma by integrated bioinformatics analysis
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https://doi.org/10.7717/peerj.11496 PubMed 34123594
May 19, 2021
MicroRNA panel in serum reveals novel diagnostic biomarkers for prostate cancer
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https://doi.org/10.7717/peerj.11441 PubMed 34055487
May 12, 2021
Genome-wide identification of the Tubby-Like Protein (TLPs) family in medicinal model plant Salvia miltiorrhiza
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https://doi.org/10.7717/peerj.11403 PubMed 34026360
May 3, 2021
Centromere protein N may be a novel malignant prognostic biomarker for hepatocellular carcinoma
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https://doi.org/10.7717/peerj.11342 PubMed 33987018
May 12, 2021
Comparative transcriptome profiling of a resistant vs susceptible bread wheat (Triticum aestivum L.) cultivar in response to water deficit and cold stress
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https://doi.org/10.7717/peerj.11428 PubMed 34026365
May 4, 2021
Mining TCGA database for gene expression in ovarian serous cystadenocarcinoma microenvironment
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https://doi.org/10.7717/peerj.11375 PubMed 33987033
May 6, 2021
Genome-wide identification, classification and expression profile analysis of the HSF gene family in Hypericum perforatum
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https://doi.org/10.7717/peerj.11345 PubMed 33996286
May 4, 2021
Comprehensive analysis based on DNA methylation and RNA-seq reveals hypermethylation of the up-regulated WT1 gene with potential mechanisms in PAM50 subtypes of breast cancer
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https://doi.org/10.7717/peerj.11377 PubMed 33987034
May 21, 2021
Evaluating the cleavage efficacy of CRISPR-Cas9 sgRNAs targeting ineffective regions of Arabidopsis thaliana genome
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https://doi.org/10.7717/peerj.11409 PubMed 34055482
May 14, 2021
Identification of diagnostic genes and vital microRNAs involved in rheumatoid arthritis: based on data mining and experimental verification
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https://doi.org/10.7717/peerj.11427 PubMed 34040897
May 19, 2021
SPMLMI: predicting lncRNA–miRNA interactions in humans using a structural perturbation method
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https://doi.org/10.7717/peerj.11426 PubMed 34055486
May 12, 2021
Analysis of multi-omics differences in left-side and right-side colon cancer
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https://doi.org/10.7717/peerj.11433 PubMed 34026368
May 28, 2021
Development of an inexpensive matrix-assisted laser desorption—time of flight mass spectrometry method for the identification of endophytes and rhizobacteria cultured from the microbiome associated with maize
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https://doi.org/10.7717/peerj.11359 PubMed 34123583
May 25, 2021
The paeonol target gene autophagy-related 5 has a potential therapeutic value in psoriasis treatment
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https://doi.org/10.7717/peerj.11278 PubMed 34113484
May 27, 2021
Identification of key microRNAs and the underlying molecular mechanism in spinal cord ischemia-reperfusion injury in rats
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https://doi.org/10.7717/peerj.11454 PubMed 34123589
May 5, 2021
Identification of P2RY13 as an immune-related prognostic biomarker in lung adenocarcinoma: A public database-based retrospective study
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https://doi.org/10.7717/peerj.11319 PubMed 33996281
May 3, 2021
re-Searcher: GUI-based bioinformatics tool for simplified genomics data mining of VCF files
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https://doi.org/10.7717/peerj.11333 PubMed 33987016
May 6, 2021
Robustness analysis of metabolic predictions in algal microbial communities based on different annotation pipelines
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https://doi.org/10.7717/peerj.11344 PubMed 33996285
May 14, 2021
The relationship between PLOD1 expression level and glioma prognosis investigated using public databases
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https://doi.org/10.7717/peerj.11422 PubMed 34040895

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I told my colleagues that PeerJ is a journal where they need to publish if they want their paper to be published quickly and with the strict peer review expected from a good journal.
Sohath Vanegas,
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