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April 2020

Table of Contents - PeerJ (Biology Articles)

April 6, 2020

DeepBindPoc: a deep learning method to rank ligand binding pockets using molecular vector representation

Haiping Zhang, Konda Mani Saravanan, Jinzhi Lin, Linbu Liao, Justin Tze-Yang Ng, Jiaxiu Zhou, Yanjie Wei

https://doi.org/10.7717/peerj.8864 PubMed 32292649

April 1, 2020

Prediction of antiviral drugs against African swine fever viruses based on protein–protein interaction analysis

Zhaozhong Zhu, Yunshi Fan, Yang Liu, Taijiao Jiang, Yang Cao, Yousong Peng

https://doi.org/10.7717/peerj.8855 PubMed 32274268

April 8, 2020

A unified simulation model for understanding the diversity of cancer evolution

Atsushi Niida, Takanori Hasegawa, Hideki Innan, Tatsuhiro Shibata, Koshi Mimori, Satoru Miyano

https://doi.org/10.7717/peerj.8842 PubMed 32296600

April 7, 2020

Understanding the spread of de novo and transmitted macrolide-resistance in Mycoplasma genitalium

Dominique Cadosch, Victor Garcia, Jørgen S. Jensen, Nicola Low, Christian L. Althaus

https://doi.org/10.7717/peerj.8913 PubMed 32292658

April 7, 2020

ECuADOR—Easy Curation of Angiosperm Duplicated Organellar Regions, a tool for cleaning and curating plastomes assembled from next generation sequencing pipelines

Angelo D. Armijos Carrion, Damien D. Hinsinger, Joeri S. Strijk

https://doi.org/10.7717/peerj.8699 PubMed 32292644

April 29, 2020

ECMPride: prediction of human extracellular matrix proteins based on the ideal dataset using hybrid features with domain evidence

Binghui Liu, Ling Leng, Xuer Sun, Yunfang Wang, Jie Ma, Yunping Zhu

https://doi.org/10.7717/peerj.9066 PubMed 32377454

April 29, 2020

A non-linear reverse-engineering method for inferring genetic regulatory networks

Siyuan Wu, Tiangang Cui, Xinan Zhang, Tianhai Tian

https://doi.org/10.7717/peerj.9065 PubMed 32391205

April 23, 2020

Identification and in silico structural and functional analysis of a trypsin-like protease from shrimp Macrobrachium carcinus

José M. Viader-Salvadó, José Alberto Aguilar Briseño, Juan A. Gallegos-López, José A. Fuentes-Garibay, Carlos Alfonso Alvarez-González, Martha Guerrero-Olazarán

https://doi.org/10.7717/peerj.9030 PubMed 32351789

April 10, 2020

Evolution of switchable aposematism: insights from individual-based simulations

Woncheol Song, Sang-im Lee, Piotr G. Jablonski

https://doi.org/10.7717/peerj.8915 PubMed 32309047

April 20, 2020

CFSP: a collaborative frequent sequence pattern discovery algorithm for nucleic acid sequence classification

He Peng

https://doi.org/10.7717/peerj.8965 PubMed 32341900

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