October 2017

Table of Contents - PeerJ (Biology Articles)

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Machine learning to analyze colon glands

Malignant colorectal cancer

October 3, 2017

Machine learning to analyze colon glands

Due to the large variability of biological tissue, machine learning techniques have shown superior performance over conventional image processing methods. Here, researchers present a deep neural network-based approach for segmentation and classification of glands in tissue of benign and malignant colorectal cancer.

- read article

October 31, 2017
Record breaking achievements by spiders and the scientists who study them
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https://doi.org/10.7717/peerj.3972 PubMed 29104823
October 6, 2017
The isolation and identification of pathogenic fungi from Tessaratoma papillosa Drury (Hemiptera: Tessaratomidae)
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https://doi.org/10.7717/peerj.3888 PubMed 29018621
October 4, 2017
Accuracy of microbial community diversity estimated by closed- and open-reference OTUs
https://doi.org/10.7717/peerj.3889 PubMed 29018622
October 24, 2017
A massive update of non-indigenous species records in Mediterranean marinas
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https://doi.org/10.7717/peerj.3954 PubMed 29085752
October 10, 2017
Illegal use of natural resources in federal protected areas of the Brazilian Amazon
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https://doi.org/10.7717/peerj.3902 PubMed 29038758
October 13, 2017
Multigene phylogeny of the scyphozoan jellyfish family Pelagiidae reveals that the common U.S. Atlantic sea nettle comprises two distinct species (Chrysaora quinquecirrha and C. chesapeakei)
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https://doi.org/10.7717/peerj.3863 PubMed 29043109
October 3, 2017
Segmentation and classification of colon glands with deep convolutional neural networks and total variation regularization
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https://doi.org/10.7717/peerj.3874 PubMed 29018612
October 17, 2017
How to normalize metatranscriptomic count data for differential expression analysis
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https://doi.org/10.7717/peerj.3859 PubMed 29062598
October 3, 2017
Development and validation of near-infrared spectroscopy for the prediction of forage quality parameters in Lolium multiflorum
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https://doi.org/10.7717/peerj.3867 PubMed 29018608
October 24, 2017
Measuring language lateralisation with different language tasks: a systematic review
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https://doi.org/10.7717/peerj.3929 PubMed 29085748
October 26, 2017
Constructing stage-structured matrix population models from life tables: comparison of methods
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https://doi.org/10.7717/peerj.3971 PubMed 29085763
October 5, 2017
Integration of lncRNA–miRNA–mRNA reveals novel insights into oviposition regulation in honey bees
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https://doi.org/10.7717/peerj.3881 PubMed 29018616
October 5, 2017
New whaitsioids (Therapsida: Therocephalia) from the Teekloof Formation of South Africa and therocephalian diversity during the end-Guadalupian extinction
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https://doi.org/10.7717/peerj.3868 PubMed 29018609
October 24, 2017
Norwegian honey bees surviving Varroa destructor mite infestations by means of natural selection
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https://doi.org/10.7717/peerj.3956 PubMed 29085753
October 12, 2017
The complete chloroplast genome sequence of strawberry (Fragaria  × ananassa Duch.) and comparison with related species of Rosaceae
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https://doi.org/10.7717/peerj.3919 PubMed 29038765
October 20, 2017
The benefits of Tai Chi and brisk walking for cognitive function and fitness in older adults
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https://doi.org/10.7717/peerj.3943 PubMed 29062610
October 16, 2017
Tolerance: the forgotten child of plant resistance
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https://doi.org/10.7717/peerj.3934 PubMed 29062607
October 17, 2017
Bacterial and fungal communities respond differently to varying tillage depth in agricultural soils
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https://doi.org/10.7717/peerj.3930 PubMed 29062604
October 3, 2017
Exceptional soft tissues preservation in a mummified frog-eating Eocene salamander
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https://doi.org/10.7717/peerj.3861 PubMed 29018606
October 26, 2017
Erwinia amylovora psychrotrophic adaptations: evidence of pathogenic potential and survival at temperate and low environmental temperatures
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https://doi.org/10.7717/peerj.3931 PubMed 29085749
October 6, 2017
Benchmark datasets for phylogenomic pipeline validation, applications for foodborne pathogen surveillance
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https://doi.org/10.7717/peerj.3893 PubMed 29372115
October 5, 2017
Assessing the living and dead proportions of cold-water coral colonies: implications for deep-water Marine Protected Area monitoring in a changing ocean
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https://doi.org/10.7717/peerj.3705 PubMed 29018595
October 6, 2017
Independent evolution of tetraloop in enterovirus oriL replicative element and its putative binding partners in virus protein 3C
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https://doi.org/10.7717/peerj.3896 PubMed 29018627
October 26, 2017
Phylogenomic analysis of the Chilean clade of Liolaemus lizards (Squamata: Liolaemidae) based on sequence capture data
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https://doi.org/10.7717/peerj.3941 PubMed 29085750
October 6, 2017
voomDDA: discovery of diagnostic biomarkers and classification of RNA-seq data
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https://doi.org/10.7717/peerj.3890 PubMed 29018623
Machine learning to analyze colon glands

Malignant colorectal cancer

October 3, 2017

Machine learning to analyze colon glands

Due to the large variability of biological tissue, machine learning techniques have shown superior performance over conventional image processing methods. Here, researchers present a deep neural network-based approach for segmentation and classification of glands in tissue of benign and malignant colorectal cancer.

- read article

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I told my colleagues that PeerJ is a journal where they need to publish if they want their paper to be published quickly and with the strict peer review expected from a good journal.
Sohath Vanegas,
PeerJ Author
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