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Burcu Bakir-Gungor
PeerJ Editor, Author & Reviewer
1,580 Points

Contributions by role

Author 605
Reviewer 140
Editor 835

Contributions by subject area

Bioinformatics
Computational Biology
Artificial Intelligence
Data Mining and Machine Learning
Genomics
Computational Science
Data Science
Molecular Biology
Microbiology
Gastroenterology and Hepatology
Diabetes and Endocrinology
Oncology
Cardiology
Internal Medicine
Soil Science
Biochemistry
Nephrology
Urology
Cell Biology
Epidemiology
Hematology

Burcu Bakir-Gungor

PeerJ Editor, Author & Reviewer

Summary

Burcu Bakir-Gungor received her B.Sc. degree in Biological Sciences and Bioengineering from Sabanci University; her M.Sc. degree in Bioinformatics from Georgia Institute of Technology; and her PhD degree from Georgia Institute of Technology/Sabanci University. She worked at the Bioinformatics Research Center, Medical College of Wisconsin, from 2007-2009. From 2009 to 2011, she worked at the Department of Computer Engineering, Bahcesehir University. Then, she worked as an Assistant Professor at the Department of Genetics and Bioinformatics, at the same university. From 2012 to 2013, she was part of the Advanced Genomics and Bioinformatics Research Center, UEKAE, BILGEM, TUBITAK. Now, she works as an Associate Professor at the Department of Computer Engineering at Abdullah Gul University. In 2022, she received a prestigious award called the L‘ORÉAL – UNESCO National Fellowship for Women in Science Programme. She is the recipient of ‘‘Best Paper’’ awards at the UBMK 2020 and 4th EvoBIO Conferences. She acted as a member of the bioinformatics advisory board of the Turkish Genome Project. She is an editorial board member of PeerJ journal; the reviewer of several prestigious international journals including Bioinformatics, Machine Learning, Journal of Computational Biology; and she is the Technical Program Committee member of UBMK and HIBIT conferences. Her research interests include bioinformatics, computational genomics, metagenomics, multi-omics, network and pathway-oriented analyses, next-generation sequencing data analysis; and applications of machine learning, data mining and pattern recognition in bioinformatics.

Artificial Intelligence Bioinformatics Blockchain Computational Biology Data Mining & Machine Learning Data Science Genomics Text Mining

Editorial Board Member

PeerJ - the Journal of Life & Environmental Sciences

Work details

Assistant Professor

Abdullah Gul University
Department of Computer Engineering

Websites

  • Google Scholar

PeerJ Contributions

  • Articles 9
  • Edited 4
  • Reviewed 3
February 7, 2025
RCE-IFE: recursive cluster elimination with intra-cluster feature elimination
Cihan Kuzudisli, Burcu Bakir-Gungor, Bahjat Qaqish, Malik Yousef
https://doi.org/10.7717/peerj-cs.2528
October 8, 2024
Network anomaly detection using Deep Autoencoder and parallel Artificial Bee Colony algorithm-trained neural network
Hilal Hacılar, Bilge Kagan Dedeturk, Burcu Bakir-Gungor, Vehbi Cagri Gungor
https://doi.org/10.7717/peerj-cs.2333
July 18, 2024
CSA-DE-LR: enhancing cardiovascular disease diagnosis with a novel hybrid machine learning approach
Beyhan Adanur Dedeturk, Bilge Kagan Dedeturk, Burcu Bakir-Gungor
https://doi.org/10.7717/peerj-cs.2197
May 22, 2024
Aguhyper: a hyperledger-based electronic health record management framework
Beyhan Adanur Dedeturk, Burcu Bakir-Gungor
https://doi.org/10.7717/peerj-cs.2060
July 17, 2023
Review of feature selection approaches based on grouping of features
Cihan Kuzudisli, Burcu Bakir-Gungor, Nurten Bulut, Bahjat Qaqish, Malik Yousef
https://doi.org/10.7717/peerj.15666 PubMed 37483989
May 9, 2023
Topological feature generation for link prediction in biological networks
Mustafa Temiz, Burcu Bakir-Gungor, Pınar Güner Şahan, Mustafa Coskun
https://doi.org/10.7717/peerj.15313 PubMed 37187525
April 25, 2022
Inflammatory bowel disease biomarkers of human gut microbiota selected via different feature selection methods
Burcu Bakir-Gungor, Hilal Hacılar, Amhar Jabeer, Ozkan Ufuk Nalbantoglu, Oya Aran, Malik Yousef
https://doi.org/10.7717/peerj.13205 PubMed 35497193
September 30, 2021
Blockchain for genomics and healthcare: a literature review, current status, classification and open issues
Beyhan Adanur Dedeturk, Ahmet Soran, Burcu Bakir-Gungor
https://doi.org/10.7717/peerj.12130 PubMed 34703661
May 19, 2021
miRcorrNet: machine learning-based integration of miRNA and mRNA expression profiles, combined with feature grouping and ranking
Malik Yousef, Gokhan Goy, Ramkrishna Mitra, Christine M. Eischen, Amhar Jabeer, Burcu Bakir-Gungor
https://doi.org/10.7717/peerj.11458 PubMed 34055490

Academic Editor on

February 12, 2025
PGSXplorer: an integrated nextflow pipeline for comprehensive quality control and polygenic score model development
Tutku Yaraş, Yavuz Oktay, Gökhan Karakülah
https://doi.org/10.7717/peerj.18973 PubMed 39959831
May 13, 2022
Identification of key differential genes in intimal hyperplasia induced by left carotid artery ligation
Lina Zhang, Jianjun Gu, Sichuan Wang, Fuming He, Kaizheng Gong
https://doi.org/10.7717/peerj.13436 PubMed 35586138
June 30, 2020
Microenvironment-related gene TNFSF13B predicts poor prognosis in kidney renal clear cell carcinoma
Mingzhe Jiang, Jiaxing Lin, Haotian Xing, Jun An, Jieping Yang, Biao Wang, Meng Yu, Yuyan Zhu
https://doi.org/10.7717/peerj.9453 PubMed 32655996
March 25, 2020
Identification of key genes and pathways affected in epicardial adipose tissue from patients with coronary artery disease by integrated bioinformatics analysis
Liao Tan, Qian Xu, Qianchen Wang, Ruizheng Shi, Guogang Zhang
https://doi.org/10.7717/peerj.8763 PubMed 32257639

Signed reviews submitted for articles published in PeerJ Note that some articles may not have the review itself made public unless authors have made them open as well.

July 10, 2023
Network neighborhood operates as a drug repositioning method for cancer treatment
Ali Cüvitoğlu, Zerrin Isik
https://doi.org/10.7717/peerj.15624 PubMed 37456868
September 14, 2022
Minimizing features while maintaining performance in data classification problems
Surani Matharaarachchi, Mike Domaratzki, Saman Muthukumarana
https://doi.org/10.7717/peerj-cs.1081
February 22, 2021
CogNet: classification of gene expression data based on ranked active-subnetwork-oriented KEGG pathway enrichment analysis
Malik Yousef, Ege Ülgen, Osman Uğur Sezerman
https://doi.org/10.7717/peerj-cs.336