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Daniel Fischer
PeerJ Editor & Reviewer
1,750 Points

Contributions by role

Reviewer 15
Editor 1,735

Contributions by subject area

Bioinformatics
Microbiology
Dentistry
Agricultural Science
Molecular Biology
Plant Science
Computational Biology
Genomics
Virology
Infectious Diseases
Statistics
Anatomy and Physiology
Neurology
Oncology
Gastroenterology and Hepatology
Mathematical Biology
Computational Science
Biogeochemistry
Ecohydrology
Genetics
Neuroscience
Biochemistry
Kinesiology
Women's Health
Medical Genetics
Aquaculture, Fisheries and Fish Science
Ecology
Marine Biology
Data Science
Mycology
Soil Science
Biodiversity
Taxonomy
Data Mining and Machine Learning

Daniel Fischer

PeerJ Editor & Reviewer

Summary

I studied Statistics and Computer Sciences at the Technical University of Dortmund, Germany. During that time, my interest was particularly in mathematical statistics with a focus on high-dimensional extensions of the univariate median. After graduating, I moved to Tampere, Finland and completed my PhD in at the University of Tampere in Biostatistics with minor Bioinformatics.

While still being enrolled as PhD student at the University I started to work as a researcher in Bioinformatics at the MTT, Jokioinen, Finland. Since 2015 I am working at the Natural Resources Institute Finland (Luke) where I finalized my PhD.

My published articles in peer-reviewed journals cover a wide range of applications as well as statistical theory. My areas of expertise are target gene detection, biomarker identification and novel gene detection with a special focus on long non-coding RNAs. Further, I have experiences in the development of statistical methods for DE testing as well as deriving novel non-parametrical tests for (e)QTL analyses. I published and maintain currently six R-packages, i.e. for (e)QTL testing, cross-species ortholog detection and dimension reduction methods.

Agricultural Science Bioinformatics Computational Biology Data Mining & Machine Learning Data Science Dentistry Genomics Mathematical Biology Microbiology Statistics

Editorial Board Member

PeerJ - the Journal of Life & Environmental Sciences

Work details

Researcher

Natural Resources Institute Finland (Luke)
January 2015
Applied Statistical Methods

Websites

  • Google Scholar
  • GitHub
  • LinkedIn
  • Blog

PeerJ Contributions

  • Edited 13

Academic Editor on

May 17, 2024
Comparing trophic position estimates using bulk and compound specific stable isotope analyses: applying new approaches to mackerel icefish Champsocephalus gunnari
Jose Antonio Canseco, Edwin J. Niklitschek, Claudio Quezada-Romegialli, Chris Yarnes, Chris Harrod
https://doi.org/10.7717/peerj.17372 PubMed 38770096
February 28, 2024
Treemendous: an R package for integrating taxonomic information across backbones
Felix Specker, Andrea Paz, Thomas W. Crowther, Daniel S. Maynard
https://doi.org/10.7717/peerj.16896 PubMed 38436026
October 4, 2023
SaPt-CNN-LSTM-AR-EA: a hybrid ensemble learning framework for time series-based multivariate DNA sequence prediction
Wu Yan, Li Tan, Li Meng-Shan, Sheng Sheng, Wang Jun, Wu Fu-an
https://doi.org/10.7717/peerj.16192 PubMed 37810796
April 7, 2022
Soil metabolomics and bacterial functional traits revealed the responses of rhizosphere soil bacterial community to long-term continuous cropping of Tibetan barley
Yuan Zhao, Youhua Yao, Hongyan Xu, Zhanling Xie, Jing Guo, Zhifan Qi, Hongchen Jiang
https://doi.org/10.7717/peerj.13254 PubMed 35415021
June 8, 2021
Meta-analysis of the effect of expression of MYB transcription factor genes on abiotic stress
Zhaolan Han, Xiaowen Shang, Lingxia Shao, Ya Wang, Xujun Zhu, Wanping Fang, Yuanchun Ma
https://doi.org/10.7717/peerj.11268 PubMed 34164229
February 26, 2021
DisCoVering potential candidates of RNAi-based therapy for COVID-19 using computational methods
Narjes Rohani, Fatemeh Ahmadi Moughari, Changiz Eslahchi
https://doi.org/10.7717/peerj.10505 PubMed 33680575
October 13, 2020
Differentially expressed transcripts and associated protein pathways in basilar artery smooth muscle cells of the high-salt intake–induced hypertensive rat
Junhao Huang, Lesha Zhang, Yang Fang, Wan Jiang, Juan Du, Jinhang Zhu, Min Hu, Bing Shen
https://doi.org/10.7717/peerj.9849 PubMed 33083107
September 28, 2020
Identification of an 8-miRNA signature as a potential prognostic biomarker for glioma
Baowei Ji, Lihua Chen, Qiang Cai, Qiao Guo, Zhibiao Chen, Du He
https://doi.org/10.7717/peerj.9943 PubMed 33062427
September 17, 2020
lcc: an R package to estimate the concordance correlation, Pearson correlation and accuracy over time
Thiago P. Oliveira, Rafael A. Moral, Silvio S. Zocchi, Clarice G.B. Demetrio, John Hinde
https://doi.org/10.7717/peerj.9850 PubMed 32995081
September 15, 2020
Numerical investigation of microbial quorum sensing under various flow conditions
Heewon Jung, Christof D. Meile
https://doi.org/10.7717/peerj.9942 PubMed 32983649
April 24, 2020
Identification of exosomal miRNAs associated with the anthracycline-induced liver injury in postoperative breast cancer patients by small RNA sequencing
Yue Zhang, Di Wang, Di Shen, Yang Luo, Yi-Qun Che
https://doi.org/10.7717/peerj.9021 PubMed 32355577
January 6, 2020
Changes in long non-coding RNA transcriptomic profiles after ischemia-reperfusion injury in rat spinal cord
Zhibin Zhou, Bin Han, Hai Jin, Aimin Chen, Lei Zhu
https://doi.org/10.7717/peerj.8293 PubMed 31934506
November 11, 2019
Genomic analyses provide insights into breed-of-origin effects from purebreds on three-way crossbred pigs
Yu Lin, Qianzi Tang, Yan Li, Mengnan He, Long Jin, Jideng Ma, Xun Wang, Keren Long, Zhiqing Huang, Xuewei Li, Yiren Gu, Mingzhou Li
https://doi.org/10.7717/peerj.8009 PubMed 31737448