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David Marjanović
PeerJ Author & Reviewer
345 Points

Contributions by role

Author 135
Preprint Author 105
Reviewer 105
Preprint Feedback 135
Answers 38
Comment 3
Questions 5

Contributions by subject area

Biodiversity
Ecology
Evolutionary Studies
Paleontology
Zoology
Taxonomy

By Q&A topic

Evolutionary-studies
Paleontology
Taxonomy
Zoology

David Marjanović

PeerJ Author & Reviewer

Summary

Biodiversity Evolutionary Studies Molecular Biology Paleontology Taxonomy Zoology

Work details

postdoc

Museum für Naturkunde, Berlin
February 2012

PeerJ Contributions

  • Articles 1
  • Preprints 1
  • Reviewed 2
  • Feedback 9
  • Questions 10
  • Answers 1
January 4, 2019
Phylogeny of Paleozoic limbed vertebrates reassessed through revision and expansion of the largest published relevant data matrix
David Marjanović, Michel Laurin
https://doi.org/10.7717/peerj.5565 PubMed 30631641
January 15, 2018 - Version: 3
Reproducibility in phylogenetics: reevaluation of the largest published morphological data matrix for phylogenetic analysis of Paleozoic limbed vertebrates
David Marjanović, Michel Laurin
https://doi.org/10.7287/peerj.preprints.1596v3

Signed reviews submitted for articles published in PeerJ Note that some articles may not have the review itself made public unless authors have made them open as well.

November 8, 2021
Returning to the roots: resolution, reproducibility, and robusticity in the phylogenetic inference of Dissorophidae (Amphibia: Temnospondyli)
Bryan M. Gee
https://doi.org/10.7717/peerj.12423 PubMed 34820181
May 17, 2016
The ontogenetic transformation of the mesosaurid tarsus: a contribution to the origin of the primitive amniotic astragalus
Graciela Piñeiro, Pablo Núñez Demarco, Melitta D. Meneghel
https://doi.org/10.7717/peerj.2036 PubMed 27231658

Provided feedback on

1 vote
15 Aug 2018

Reproducibility in phylogenetics: reevaluation of the largest published morphological data matrix for phylogenetic analysis of Paleozoic limbed vertebrates

**Accepted** for publication two days ago. The accepted version differs from this preprint in containing more and better explanations and a quantification of similarity between the...

12 Jan 2016

Reevaluation of the largest published morphological data matrix for phylogenetic analysis of Paleozoic limbed vertebrates

Two mentions of "Appendix-Table 4" actually refer to Appendix-Table 6. One of them correctly links to Appendix-Table 6 in this pdf. The reference "Ezcurra (2012)" is cited in th...

25 Feb 2016

Reevaluation of the largest published morphological data matrix for phylogenetic analysis of Paleozoic limbed vertebrates

The reference "Ruta (2011)" is cited in the text, but missing from the reference list; thanks to the reviewer Michael Buchwitz for pointing this out. It is: %%**Ruta, M. 2011.**...

12 Oct 2016

Reevaluation of the largest published morphological data matrix for phylogenetic analysis of Paleozoic limbed vertebrates

Oops. I informed M. Ruta and the other colleagues I had asked for the matrix file, but then kept forgetting to add this here for the last few turbulent months: the confusion about...

19 Jan 2017

Reevaluation of the largest published morphological data matrix for phylogenetic analysis of Paleozoic limbed vertebrates

PAUP* 4.0b10 has a bug that sometimes duplicates irreproducible numbers of most parsimonious trees. Consequently, the numbers of MPTs we report for Analyses R1, R2 and R4–R12 are w...

28 Mar 2017

Reevaluation of the largest published morphological data matrix for phylogenetic analysis of Paleozoic limbed vertebrates

The Nomenclature section states that the paper by Pereira Pacheco et al. (2016) was not registered in ZooBank. It was; the identifier is between the abstract and the keywords. I ma...

03 Apr 2017

Reevaluation of the largest published morphological data matrix for phylogenetic analysis of Paleozoic limbed vertebrates

Thanks to Brad McFeeters for pointing out that we cited Simmons (2011a, b) in the text (Why we only used maximum parsimony) but included only one Simmons (2011) in the references l...

16 Jan 2018

Reproducibility in phylogenetics: reevaluation of the largest published morphological data matrix for phylogenetic analysis of Paleozoic limbed vertebrates

In the Table of Contents, the page numbers from 82 onward are all one too high, i.e. the section claimed to begin on p. 82 really begins on p. 81 (just like the preceding one). The...

16 Jan 2018

Reproducibility in phylogenetics: reevaluation of the largest published morphological data matrix for phylogenetic analysis of Paleozoic limbed vertebrates

As required by PeerJ Preprints, this pdf was resized to **US Letter**. If anybody outside the US (or Canada?) wants to print it out, I recommend using [the original-sized version a...

27 Questions

1
Preservation
about Sesamoids in Caudata and Gymnophiona (Lissamphibia): absences and evidence
0
The skull surface of Kotlassia, or lack thereof
about Postcranial anatomy and histology of Seymouria, and the terrestriality of seymouriamorphs
0
Why would Sillerpeton be aquatic?
about Postcranial anatomy and histology of Seymouria, and the terrestriality of seymouriamorphs
0
Definitive terrestrial adult of Discosauriscus austriacus
about Postcranial anatomy and histology of Seymouria, and the terrestriality of seymouriamorphs
0
Describing phylogenies
about Postcranial anatomy and histology of Seymouria, and the terrestriality of seymouriamorphs
0
"Atahal" – Aathal
about Cranial anatomy of Allosaurus jimmadseni, a new species from the lower part of the Morrison Formation (Upper Jurassic) of Western North America
0
Outgroup constraint
about New information on the early Permian lanthanosuchoid Feeserpeton oklahomensis based on computed tomography
0
...not that it matters, but...
about New information on the early Permian lanthanosuchoid Feeserpeton oklahomensis based on computed tomography
0
Feeserpeton oklahomense
about New information on the early Permian lanthanosuchoid Feeserpeton oklahomensis based on computed tomography
0
Blunder alert: implied weighting is not reweighting
about Phylogeny of Paleozoic limbed vertebrates reassessed through revision and expansion of the largest published relevant data matrix
More questions…

1 Answer

3
How meaningful can such a parsimony strict consensus tree be?