WANT A PROFILE LIKE THIS?
Create my FREE Plan Or learn about other options
Matthew DeMaere
PeerJ Author & Reviewer
375 Points

Contributions by role

Author 270
Preprint Author 70
Reviewer 35

Contributions by subject area

Bioinformatics
Computational Biology
Genomics
Microbiology
Computational Science
Biodiversity
Zoology
Data Mining and Machine Learning

Matthew Z DeMaere

PeerJ Author & Reviewer

Summary

Bioinformatics Computational Biology Data Mining & Machine Learning Data Science Genomics Microbiology

Past or current institution affiliations

University of Technology Sydney

Work details

Postdoc

University of Technology Sydney
October 2013 - April 2025
Australian Institute for Microbiology and Infection

Websites

  • Google Scholar
  • GitHub

PeerJ Contributions

  • Articles 2
  • Preprints 1
  • Reviewed 1
  • Questions 1
September 19, 2017
Evaluation of ddRADseq for reduced representation metagenome sequencing
Michael Y. Liu, Paul Worden, Leigh G. Monahan, Matthew Z. DeMaere, Catherine M. Burke, Steven P. Djordjevic, Ian G. Charles, Aaron E. Darling
https://doi.org/10.7717/peerj.3837 PubMed 28948110
November 8, 2016
Deconvoluting simulated metagenomes: the performance of hard- and soft- clustering algorithms applied to metagenomic chromosome conformation capture (3C)
Matthew Z. DeMaere, Aaron E. Darling
https://doi.org/10.7717/peerj.2676 PubMed 27843713
May 13, 2016 - Version: 2
Deconvoluting simulated metagenomes: the performance of hard- and soft- clustering algorithms applied to metagenomic chromosome conformation capture (3C)
Matthew Z DeMaere, Aaron E Darling
https://doi.org/10.7287/peerj.preprints.1974v2

Signed reviews submitted for articles published in PeerJ Note that some articles may not have the review itself made public unless authors have made them open as well.

September 22, 2023
Integrating chromatin conformation information in a self-supervised learning model improves metagenome binning
Harrison Ho, Mansi Chovatia, Rob Egan, Guifen He, Yuko Yoshinaga, Ivan Liachko, Ronan O’Malley, Zhong Wang
https://doi.org/10.7717/peerj.16129 PubMed 37753177

1 Question

0
Feedback on minor issues
about Expanding standards in viromics: in silico evaluation of dsDNA viral genome identification, classification, and auxiliary metabolic gene curation