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Thiago Venancio
PeerJ Editor & Author
1,770 Points

Contributions by role

Preprint Author 35
Editor 1,735

Contributions by subject area

Ecology
Environmental Sciences
Microbiology
Ecotoxicology
Agricultural Science
Genetics
Genomics
Molecular Biology
Bioinformatics
Plant Science
Biodiversity
Mycology
Soil Science
Computational Biology
Virology
Biotechnology
Entomology
Biochemistry
Developmental Biology
Veterinary Medicine
Infectious Diseases
Evolutionary Studies

Thiago M Venancio

PeerJ Editor & Author

Summary

Associate Professor (UENF; Brazil), 2010-present; Postdoctoral fellow at NCBI-NIH (USA), 2008-2010; PhD in Bioinformatics (University of Sao Paulo, Brazil), 2004-2008.

My lab focuses on genomic and transcriptomic studies of plants, fungi and bacteria. Our main goals involve the generation and analysis of big biological datasets using computational methods to understand key aspects of living organisms, such as: 1) the evolution of multidrug resistance genes in Fungi; 2) the evolutionary basis of gene essentiality in Bacteria and Archaea; 3) the transcriptional landscape and regulatory apparatus of land plants, particularly legumes.

Bioinformatics Computational Biology Evolutionary Studies Genomics Microbiology Plant Science

Editorial Board Member

PeerJ - the Journal of Life & Environmental Sciences

Past or current institution affiliations

Universidade Estadual do Norte Fluminense

Work details

Associate Professor

Universidade Estadual do Norte Fluminense
October 2010
CBB-LQFPP
My lab focuses on genomic and transcriptomic studies of plants, fungi and bacteria. Our main goals involve the generation and analysis of big biological datasets using computational methods to understand key aspects of living organisms, such as: 1) the evolution of multidrug resistance genes in Fungi; 2) the evolutionary basis of gene essentiality in Bacteria and Archaea; 3) the transcriptional landscape and regulatory apparatus of land plants, particularly legumes.

PeerJ Contributions

  • Preprints 1
  • Edited 12
September 27, 2015 - Version: 1
Microbial interactions and implications for oil biodegradation process in mangrove sediments
Adriana Daudt Grativol, Albany Marchetti, Rita M Wetler-Tonini, Thiago M Venancio, Carlos EN Gatts, Fabiano L Thompson, Carlos E Rezende
https://doi.org/10.7287/peerj.preprints.1398v1

Academic Editor on

January 3, 2022
Comparative genomics of the black rot pathogen Xanthomonas campestris pv. campestris and non-pathogenic co-inhabitant Xanthomonas melonis from Trinidad reveal unique pathogenicity determinants and secretion system profiles
Stephen D. B. Jr. Ramnarine, Jayaraj Jayaraman, Adesh Ramsubhag
https://doi.org/10.7717/peerj.12632 PubMed 35036136
December 3, 2020
Foliar mycoendophytome of an endemic plant of the Mediterranean biome (Myrtus communis) reveals the dominance of basidiomycete woody saprotrophs
Aline Bruna M. Vaz, Paula Luize C. Fonseca, Felipe F. Silva, Gabriel Quintanilha-Peixoto, Inmaculada Sampedro, Jose A. Siles, Anderson Carmo, Rodrigo B. Kato, Vasco Azevedo, Fernanda Badotti, Juan A. Ocampo, Carlos A. Rosa, Aristóteles Góes-Neto
https://doi.org/10.7717/peerj.10487 PubMed 33344092
September 22, 2020
Genome-wide identification and expression analysis of the ERF transcription factor family in pineapple (Ananas comosus (L.) Merr.)
Youmei Huang, Yanhui Liu, Man Zhang, Mengnan Chai, Qing He, Bello Hassan Jakada, Fangqian Chen, Huihuang Chen, Xingyue Jin, Hanyang Cai, Yuan Qin
https://doi.org/10.7717/peerj.10014 PubMed 33024641
February 26, 2020
Iroki: automatic customization and visualization of phylogenetic trees
Ryan M. Moore, Amelia O. Harrison, Sean M. McAllister, Shawn W. Polson, K. Eric Wommack
https://doi.org/10.7717/peerj.8584 PubMed 32149022
June 27, 2019
The comparative population genetics of Neisseria meningitidis and Neisseria gonorrhoeae
Lucile Vigué, Adam Eyre-Walker
https://doi.org/10.7717/peerj.7216 PubMed 31293838
January 9, 2019
Whole-genome comparisons of Penicillium spp. reveals secondary metabolic gene clusters and candidate genes associated with fungal aggressiveness during apple fruit decay
Guangxi Wu, Wayne M. Jurick II, Franz J. Lichtner, Hui Peng, Guohua Yin, Verneta L. Gaskins, Yanbin Yin, Sui-Sheng Hua, Kari A. Peter, Joan W. Bennett
https://doi.org/10.7717/peerj.6170 PubMed 30643697
January 3, 2019
Analysis of the complete genome sequence of a marine-derived strain Streptomyces sp. S063 CGMCC 14582 reveals its biosynthetic potential to produce novel anti-complement agents and peptides
Liang-Yu Chen, Hao-Tian Cui, Chun Su, Feng-Wu Bai, Xin-Qing Zhao
https://doi.org/10.7717/peerj.6122 PubMed 30627488
May 30, 2017
Modeling the cis-regulatory modules of genes expressed in developmental stages of Drosophila melanogaster
Yosvany López, Alexis Vandenbon, Akinao Nose, Kenta Nakai
https://doi.org/10.7717/peerj.3389 PubMed 28584716
April 27, 2017
Analysis of the in planta transcriptome expressed by the corn pathogen Pantoea stewartii subsp. stewartii via RNA-Seq
Holly Packard, Alison Kernell Burke, Roderick V. Jensen, Ann M. Stevens
https://doi.org/10.7717/peerj.3237 PubMed 28462040
January 31, 2017
Genomic and transcriptomic resources for assassin flies including the complete genome sequence of Proctacanthus coquilletti (Insecta: Diptera: Asilidae) and 16 representative transcriptomes
Rebecca B. Dikow, Paul B. Frandsen, Mauren Turcatel, Torsten Dikow
https://doi.org/10.7717/peerj.2951 PubMed 28168115
December 14, 2016
Examination of Mycobacterium avium subspecies paratuberculosis mixed genotype infections in dairy animals using a whole genome sequencing approach
Fraser W. Davidson, Christina Ahlstrom, Jeroen De Buck, Hugh G. Whitney, Kapil Tahlan
https://doi.org/10.7717/peerj.2793 PubMed 27994984
November 10, 2016
Comparative analysis of the complete chloroplast genome sequences in psammophytic Haloxylon species (Amaranthaceae)
Wenpan Dong, Chao Xu, Delu Li, Xiaobai Jin, Ruili Li, Qi Lu, Zhili Suo
https://doi.org/10.7717/peerj.2699 PubMed 27867769