Biology & Life sciences - Table of Contents

October 16, 2023

Identification and validation of key genes associated with pathogenesis and prognosis of gastric cancer

Ai Li, Yan Li, Yueyue Li, Mingming Zhang, Hong Zhang, Feixue Chen

https://doi.org/10.7717/peerj.16243 PubMed 37868053

October 26, 2023

Identification of key genes and validation of key gene aquaporin 1 on Wilms’ tumor metastasis

Hong Liu, Chen Jin, Xia Yang, Nan Xia, Chunzhi Guo, Qian Dong

https://doi.org/10.7717/peerj.16025 PubMed 37904849

October 4, 2023

Diversity and structure of the root-associated bacterial microbiomes of four mangrove tree species, revealed by high-throughput sequencing

Jinlei Sui, Xiaowen He, Guohui Yi, Limin Zhou, Shunqing Liu, Qianqian Chen, Xiaohu Xiao, Jinyan Wu

https://doi.org/10.7717/peerj.16156 PubMed 37810771

October 16, 2023

Genome sizes and repeatome evolution in zoantharians (Cnidaria: Hexacorallia: Zoantharia)

Chloé Julie Loïs Fourreau, Hiroki Kise, Mylena Daiana Santander, Stacy Pirro, Maximiliano M. Maronna, Angelo Poliseno, Maria E.A. Santos, James Davis Reimer

https://doi.org/10.7717/peerj.16188 PubMed 37868064

October 10, 2023

HtrA3: a promising prognostic biomarker and therapeutic target for head and neck squamous cell carcinoma

Yan Chen, Jianfeng Yang, Hangbin Jin, Weiwei Wen, Ying Xu, Xiaofeng Zhang, Yu Wang

https://doi.org/10.7717/peerj.16237 PubMed 37842043

October 20, 2023

Analysis of the apoplast fluid proteome during the induction of systemic acquired resistance in Arabidopsis thaliana

Shuna Jiang, Liying Pan, Qingfeng Zhou, Wenjie Xu, Fuge He, Lei Zhang, Hang Gao

https://doi.org/10.7717/peerj.16324 PubMed 37876907

October 18, 2023

Predicting protein and pathway associations for understudied dark kinases using pattern-constrained knowledge graph embedding

Mariah V. Salcedo, Nathan Gravel, Abbas Keshavarzi, Liang-Chin Huang, Krzysztof J. Kochut, Natarajan Kannan

https://doi.org/10.7717/peerj.15815 PubMed 37868056

October 23, 2023

Comprehensive genomic characterisation of the NAC transcription factor family and its response to drought stress in Eucommia ulmoides

Qi Wang, FengCheng Hu, ZhaoQun Yao, XinFeng Zhao, GuangMing Chu, Jing Ye

https://doi.org/10.7717/peerj.16298 PubMed 37901460

October 10, 2023

Identification of a novel intermittent hypoxia-related prognostic lncRNA signature and the ceRNA of lncRNA GSEC/miR-873-3p/EGLN3 regulatory axis in lung adenocarcinoma

Peijun Liu, Long Zhou, Hao Chen, Yang He, Guangcai Li, Ke Hu

https://doi.org/10.7717/peerj.16242 PubMed 37842058

October 4, 2023

SaPt-CNN-LSTM-AR-EA: a hybrid ensemble learning framework for time series-based multivariate DNA sequence prediction

Wu Yan, Li Tan, Li Meng-Shan, Sheng Sheng, Wang Jun, Wu Fu-an

https://doi.org/10.7717/peerj.16192 PubMed 37810796

October 4, 2023

Genome sequence analysis of Malayan pangolin (Manis javanica) forensic samples reveals the presence of Paraburkholderia fungorum sequences

Ka Yun Tan, Siwei Deng, Tze King Tan, Ranjeev Hari, Frankie Thomas Sitam, Rofina Yasmin Othman, Kum Thong Wong, Taznim Begam Mohd Mohidin, Siew Woh Choo

https://doi.org/10.7717/peerj.16002 PubMed 37810781

October 19, 2023

Transcriptome analysis reveals the mechanism of pyroptosis-related genes in septic cardiomyopathy

Haoyan Zhu, Jiahe Wu, Chenze Li, Ziyue Zeng, Tianwen He, Xin Liu, Qiongxin Wang, Xiaorong Hu, Zhibing Lu, Huanhuan Cai

https://doi.org/10.7717/peerj.16214 PubMed 37872948

October 5, 2023

Impact of forest disturbance on microarthropod communities depends on underlying ecological gradients and species traits

Davide Nardi, Diego Fontaneto, Matteo Girardi, Isaac Chini, Daniela Bertoldi, Roberto Larcher, Cristiano Vernesi

https://doi.org/10.7717/peerj.15959 PubMed 37814629

October 11, 2023

Prognostic analyses of genes associated with anoikis in breast cancer

Jingyu Cao, Xinyi Ma, Guijuan Zhang, Shouyi Hong, Ruirui Ma, Yanqiu Wang, Xianxin Yan, Min Ma

https://doi.org/10.7717/peerj.15475 PubMed 37842046

October 24, 2023

The comprehensive analysis of the prognostic and functional role of N-terminal methyltransferases 1 in pan-cancer

Lifan Tan, Wensong Li, Qin Su

https://doi.org/10.7717/peerj.16263 PubMed 37901469

October 31, 2023

The efficacy of digital cognitive behavioral therapy for insomnia and depression: a systematic review and meta-analysis of randomized controlled trials

Wenyao Lin, Na Li, Lili Yang, Yuqing Zhang

https://doi.org/10.7717/peerj.16137 PubMed 37927792

October 3, 2023

Identification and validation of hub genes involved in foam cell formation and atherosclerosis development via bioinformatics

Da Teng, Hongping Chen, Wenjuan Jia, Qingmiao Ren, Xiaoning Ding, Lihui Zhang, Lei Gong, Hua Wang, Lin Zhong, Jun Yang

https://doi.org/10.7717/peerj.16122 PubMed 37810795

October 10, 2023

Complete chloroplast genome assembly and phylogenetic analysis of blackcurrant (Ribes nigrum), red and white currant (Ribes rubrum), and gooseberry (Ribes uva-crispa) provide new insights into the phylogeny of Grossulariaceae

Xinyu Sun, Ying Zhan, Songlin Li, Yu Liu, Qiang Fu, Xin Quan, Jinyu Xiong, Huixin Gang, Lijun Zhang, Huijuan Qi, Aoxue Wang, Junwei Huo, Dong Qin, Chenqiao Zhu

https://doi.org/10.7717/peerj.16272 PubMed 37842068

October 10, 2023

Identification of ACHE as the hub gene targeting solasonine associated with non-small cell lung cancer (NSCLC) using integrated bioinformatics analysis

Tong Liu, Boke Zhang, Yating Gao, Xingxing Zhang, Jiabing Tong, Zegeng Li

https://doi.org/10.7717/peerj.16195 PubMed 37842037

October 26, 2023

Comparative transcriptome analysis on candidate genes associated with fruiting body growth and development in Lyophyllum decastes

Shanwen Ke, LingQiang Ding, Xin Niu, Huajia Shan, Liru Song, Yali Xi, Jiuhai Feng, Shenglong Wei, Qianqian Liang

https://doi.org/10.7717/peerj.16288 PubMed 37904843

October 17, 2023

Ginsenoside Rb1 enhanced immunity and altered the gut microflora in mice immunized by H1N1 influenza vaccine

Chuanqi Wan, Rufeng Lu, Chen Zhu, Haibo Wu, Guannan Shen, Yang Yang, Xiaowei Wu, Bangjiang Fang, Yuzhou He