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Bioinformatics at PeerJ

Latest articles

Microbial allies: shaping growth, physiology, and rhizosphere dynamics of onion (Allium cepa L.)
Pranjali A. Gedam, Kiran Khandagale, Vitthal T. Barvkar, Snehal Bhandari, Sucheta Patil, Sagar Wayal, Indira Bhangare, Kiran P. Bhagat, Kiran Landage, Rajiv Kale, Vivek Bhoite, Sanket More, Vijay Mahajan, Suresh Gawande
Analysis of molecular subtypes and prognostic signature of senescence-associated secretory phenotype in pancreatic cancer
Yuewen Kuang, Mingkun Jia, Yuming Zhu, Zhiyong Xiang
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AI-driven de novo design of BRAF inhibitors with enhanced binding affinity and optimized drug-likeness
Zuokun Lu, Aili Zhang
Near-infrared spectroscopy combined with machine learning for plasma-based discriminant diagnosis of malignant mesothelioma: a retrospective study
Yixuan Gu, Ruting Wang, Weimin Mao, Zhongjian Chen

Widely read

scikit-image: image processing in Python
Stéfan van der Walt, Johannes L. Schönberger, Juan Nunez-Iglesias, François Boulogne, Joshua D. Warner, Neil Yager, Emmanuelle Gouillart, Tony Yu
160,421 views · 34,224 downloads
Var3PPred: variant prediction based on 3-D structure and sequence analyses of protein-protein interactions on autoinflammatory diseases
Alper Bülbül, Emel Timucin, Ahmet Can Timuçin, Osman Uğur Sezerman, Eda Tahir Turanli
104,800 views · 71 downloads
VSEARCH: a versatile open source tool for metagenomics
Torbjørn Rognes, Tomáš Flouri, Ben Nichols, Christopher Quince, Frédéric Mahé
81,947 views · 9,972 downloads
Data reuse and the open data citation advantage
Heather A. Piwowar, Todd J. Vision
71,065 views · 6,060 downloads
MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
Dongwan D. Kang, Jeff Froula, Rob Egan, Zhong Wang
49,530 views · 7,021 downloads

Editors' picks

5 January 2026
Cholesterol and steroid synthesis pathways may be involved in the inhibition of osteosarcoma cell viability by calcium-sensing receptor antagonism
Luchuan Wang, Jianfa Wang, Xinjie Chu, Yao Liu, Yanping Fan, Xunzhong Qi, Jin Guo, Shuqiu Wang
Preliminary insights into the gut microbiota of patients with rheumatoid arthritis in Vietnam
Bich Ngoc Nguyen, Lan Thi Ngoc Nguyen, Dinh Thi My Trinh, Hien Thao Nguyen, Tam Thi Thanh Tran

Recently cited

VSEARCH: a versatile open source tool for metagenomics
Torbjørn Rognes, Tomáš Flouri, Ben Nichols, Christopher Quince, Frédéric Mahé
8,763 citations · 81,947 views · 9,972 downloads
scikit-image: image processing in Python
Stéfan van der Walt, Johannes L. Schönberger, Juan Nunez-Iglesias, François Boulogne, Joshua D. Warner, Neil Yager, Emmanuelle Gouillart, Tony Yu
5,340 citations · 160,421 views · 34,224 downloads
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This Bioinformatics Overlay is a subset of the peer-reviewed articles found in PeerJ, PeerJ Computer Science .

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PeerJ Expert Curations: Molecular Ecology
RiTA 2023: Robotics and AI for Digital Futures
International Conference on Machine Learning and Intelligent Systems (MLIS)
Revolutionizing Healthcare: The Role of AI and Machine Learning
Artificial Intelligence for Mental Health: Advancements, Challenges, and Ethical Implications
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