Bioinformatics and Genomics

Article commentary

VSEARCH: a versatile open source tool for metagenomics
337 citations · 11,454 views · 1,975 downloads
Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction
309 citations · 20,450 views · 3,184 downloads
scikit-image: image processing in Python
293 citations · 63,164 views · 12,903 downloads
PhyloSift: phylogenetic analysis of genomes and metagenomes
220 citations · 26,672 views · 4,710 downloads
Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences
187 citations · 17,226 views · 3,397 downloads
MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
173 citations · 18,755 views · 3,044 downloads
Swarm: robust and fast clustering method for amplicon-based studies
159 citations · 12,805 views · 1,828 downloads
Anvi’o: an advanced analysis and visualization platform for ‘omics data
108 citations · 16,590 views · 2,732 downloads
Compact graphical representation of phylogenetic data and metadata with GraPhlAn
106 citations · 17,218 views · 2,466 downloads
Data reuse and the open data citation advantage
123 citations · 32,416 views · 3,084 downloads

Discussing these articles

25 days ago
Compact graphical representation of phylogenetic data and metadata with GraPhlAn https://t.co/l9efgsGQPT @thePeerJ GraPhlAn https://t.co/ejaEaNqs45 tutorial GraPhlAn tutorial *Python-based software

116 days ago
At last! VSEARCH is here https://t.co/LerRP1DBVV via @thePeerJ

scikit-image: image processing in Python https://t.co/FAreTqwW6a via @thePeerJ

#R análisis genético de poblaciones con reproducción clonal, parcialmente clonal y/o sexual https://t.co/nkfOayPmGl #rstatsES #DataScience https://t.co/xU3qpbABaM

MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities [PeerJ] https://t.co/ItshY8nGsS

524 days ago
@LHuntNeuro Something like: https://t.co/VdhAWlQggj ? Library / OA folk like @McDawg or @torstenreimer may know more on citation benefit of #OpenData

A population genetic R-evolution
http://www.molecularecologist.com/2015/01/a-population-genetic-r-evolution/

Scientists must share early and share often to boost citations
http://theconversation.com/scientists-must-share-early-and-share-often-to-boost-citations-18699