Bioinformatics and Genomics

Editors' Picks

VSEARCH: a versatile open source tool for metagenomics
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scikit-image: image processing in Python
841 citations · 83,528 views · 21,394 downloads
Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction
721 citations · 25,785 views · 4,194 downloads
MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
565 citations · 27,695 views · 4,670 downloads
Using observation-level random effects to model overdispersion in count data in ecology and evolution
386 citations · 19,361 views · 4,700 downloads
Anvi’o: an advanced analysis and visualization platform for ‘omics data
431 citations · 24,896 views · 4,228 downloads
Probabilistic programming in Python using PyMC3
343 citations · 44,639 views · 8,137 downloads
PhyloSift: phylogenetic analysis of genomes and metagenomes
351 citations · 30,773 views · 5,294 downloads
Swarm: robust and fast clustering method for amplicon-based studies
327 citations · 15,853 views · 2,352 downloads
Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences
314 citations · 19,729 views · 3,901 downloads
Bioinformatics and Genomics
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Section discussions

Кто проживает в горах океана? Astrolirus patricki – семирукие морские звезды, обнаруженные на подводных горах Тихого океана в компании губок, на которые иногда даже по трое забираются. Новый вид назван, конечно же, в честь Патрика, дружочка Спанч Боба.

Exact integer linear programming solvers outperform simulated annealing for solving conservation planning problems https://t.co/evOIQae7lI @thePeerJ https://t.co/3nEu1FQJU7

Characterization of the bacterial microbiota composition and #evolution at different intestinal tract in wild pigs (Sus scrofa ussuricus) https://t.co/i3sbEVWvF4 @thePeerJ https://t.co/LLMZyXoK2N

Microbiome analysis by primmorphs. Took more than year to publish https://t.co/8gcUsHlzfM с помощью @thePeerJ

7 immune-related risk signatures of HCC https://t.co/PFu3q1sFaT via @thePeerJ

My article has been published today in @thePeerJ https://t.co/NwEZeamTIa #Biodiversity #MolecularBiology #PlantScience

A population genetic R-evolution
http://www.molecularecologist.com/2015/01/a-population-genetic-r-evolution/