Preprints (not yet peer-reviewed)

43 downloads
299 views

Targeted high-throughput sequencing using hybrid-enrichment offers a promising source of data for inferring multiple, meaningfully resolved, independent gene trees suitable to address challenging phylogenetic problems in species complexes and rapid radiations....

["Bioinformatics","Evolutionary Studies","Plant Science"]
doi:10.7287/peerj.preprints.2763v2
11 downloads
110 views

Background. Restoration of degraded forest ecosystem is crucial for regional sustainable development. To protect the country’s fragile and fragmented environment, the Chinese government has initiated an ecological engineering, the Natural Forest Protection Program...

["Biodiversity","Conservation Biology","Ecology","Plant Science","Soil Science"]
doi:10.7287/peerj.preprints.2773v2
39 downloads
126 views

WRKY proteins, comprising one of the largest transcription factor families in plant kingdom, play crucial roles in the plant development and stress responses. Despite several studies on WRKYs in wheat (Triticum aestivum L.) were investigated, functional annotation...

["Genetics","Plant Science"]
doi:10.7287/peerj.preprints.2809v1
37 downloads
105 views

We present survey questions useful for describing agricultural seed systems. The questions are designed so that they can be used for standardized comparisons among seed systems, addressing both networks for seed movement and networks for the communication of information...

["Agricultural Science","Microbiology","Plant Science","Statistics","Coupled Natural and Human Systems"]
doi:10.7287/peerj.preprints.2806v1
12 downloads
53 views

Plant sexual reproduction is a complicated and a key biological process with profuse interactions between pollen and pistil. This process determines whether fertilization will be successful or not and thus affect the seed setting. To explore the reason why L. chinense...

["Agricultural Science","Plant Science"]
doi:10.7287/peerj.preprints.2803v1
8 downloads
76 views

Basic idea of science is reproducibility of phenomena and experiments. Reproducibility of data analyses and reports is becoming more and more important. It requires structured organization of data, augmented with enought metadata for future re-use of data. Our...

["Bioinformatics","Genomics","Plant Science","Statistics","Computational Science"]
doi:10.7287/peerj.preprints.2791v1
19 downloads
158 views

Pseudomonas syringae pv. actinidiae (PSA) strain is a major problem for the kiwifruit industry worldwide. So far, 5 biovars of PSA have been identified, of which the most virulent form is biovar 3. This is the only biovar that has been detected in Chile, which...

["Microbiology","Plant Science"]
doi:10.7287/peerj.preprints.2787v1
28 downloads
74 views

Background. The red gum lerp psyllid Glycaspis brimblecombei Moore (Hemiptera: Psyllidae), an eucalypt insect pest from Australia, was reported in Brazil in 2003. This study evaluated damage patterns of this pest and the parasitism rates of Psyllaephagus bliteus...

["Agricultural Science","Entomology","Plant Science"]
doi:10.7287/peerj.preprints.2783v1
33 downloads
229 views

Introduction: Rhizospheres, the most active interfaces between plants and soils, play a central role in a long-term maintenance of the biosphere. The anti-erodibility of soils (AES) regulated by the root exudates is crucial to the stability of the rhizospheres....

["Ecology","Plant Science","Soil Science"]
doi:10.7287/peerj.preprints.2624v2
76 downloads
309 views

We estimated the genetic diversity of 50 Jatropha curcas Costa Rican samples using 18 EST-SSR, one G-SSR and nrDNA-ITS markers. We also evaluated the phylogenetic relationships among samples using nuclear ribosomal ITS markers. Non-toxicity was also evaluated using...

["Biodiversity","Molecular Biology","Plant Science"]
doi:10.7287/peerj.preprints.2469v2
15 downloads
89 views

Harding grass (Phalaris aquatica), an invasive non-native species of bunchgrass, has been introduced to grasslands in many regions of California, particularly those with a history of disturbance, such as tilling and grazing. Due do the invasive nature of Harding...

["Agricultural Science","Animal Behavior","Biodiversity","Ecology","Plant Science"]
doi:10.7287/peerj.preprints.2756v1
43 downloads
114 views

Based on sequence data from the nuclear ITS and four cpDNA regions (matK, trnH-psbA, trnL-trnF, rbcL), phylogeny of the tribe Thermopsideae was inferred. Our analyses supported this tribe being merged into a monophyletic Sophoreae in a broad sense, with exclusion...

["Biodiversity","Biogeography","Evolutionary Studies","Genetics","Plant Science"]
doi:10.7287/peerj.preprints.2757v1
21 downloads
63 views

Late-ripening characteristics of a fruit is a good agronomic trait for extending both the harvest period and marketing time. However, underlying molecular basis of the late-ripening mechanism in fruit is largely unknown. In this study, RNA sequencing (RNA-seq)...

["Agricultural Science","Biotechnology","Molecular Biology","Plant Science"]
doi:10.7287/peerj.preprints.2744v1
21 downloads
96 views

Background: Food preservation is essential to the growing world population, food economy. Freezing is a commonly used method for food preservation. While extending the life of the product, freezing has detrimental effects. It is causing loss of food weight and...

["Agricultural Science","Biophysics","Cell Biology","Food Science and Technology","Plant Science"]
doi:10.7287/peerj.preprints.2740v1
27 downloads
166 views

1. The elevational gradient in plant defense (EGPD) hypothesis posits that natural enemy pressures increase positively alongside temperature across elevational climatic gradients, thereby selecting for enhanced defenses at lower elevations while leaving plants...

["Ecology","Entomology","Plant Science"]
doi:10.7287/peerj.preprints.2733v1
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